RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 RMND1Q9NWS8 449 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 PCDHA5Q9Y5H7 936 aa22.21■■□□□ 1.15
PNKP-211ENST00000598020 CITO14578 2027 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 CARNS1A5YM72 827 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 OGTO15294 1046 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 GARTP22102 1010 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 MLH1P40692 756 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 AFF1P51825 1210 aaKnown RBP22.2■■□□□ 1.14
PNKP-211ENST00000598020 POU5F1Q01860 360 aaKnown RBP22.2■■□□□ 1.14
PNKP-211ENST00000598020 XKR4Q5GH76 650 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 ALKAL1Q6UXT8 129 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 SPRED2Q7Z698 418 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 THNSL1Q8IYQ7 743 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 ZFP42Q96MM3 310 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 C17orf80Q9BSJ5 609 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 MSTO1Q9BUK6 570 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 GTPBP4Q9BZE4 634 aaKnown RBP22.2■■□□□ 1.14
PNKP-211ENST00000598020 GBP3Q9H0R5 595 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 IKZF4Q9H2S9 585 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 TOPORSQ9NS56 1045 aaPredicted RBP22.2■■□□□ 1.14
PNKP-211ENST00000598020 INPP5FQ9Y2H2 1132 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 GDAQ9Y2T3 454 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 KIAA1671Q9BY89 1806 aa22.2■■□□□ 1.14
PNKP-211ENST00000598020 TISP43B9A030 160 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 CLTAP09496 248 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 LAG3P18627 525 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 MATR3P43243 847 aaKnown RBP eCLIP22.19■■□□□ 1.14
PNKP-211ENST00000598020 YARSP54577 528 aaKnown RBP22.19■■□□□ 1.14
PNKP-211ENST00000598020 EPC2Q52LR7 807 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 SMARCE1Q969G3 411 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 AAASQ9NRG9 546 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 MIOSQ9NXC5 875 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 KLK14Q9P0G3 267 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 CGNQ9P2M7 1197 aaKnown RBP22.19■■□□□ 1.14
PNKP-211ENST00000598020 TRIP11Q15643 1979 aa22.19■■□□□ 1.14
PNKP-211ENST00000598020 TDRD15B5MCY1 1934 aaKnown RBP22.18■■□□□ 1.14
PNKP-211ENST00000598020 KIAA0391O15091 583 aaKnown RBP22.18■■□□□ 1.14
PNKP-211ENST00000598020 TGFB1I1O43294 461 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 HARSP12081 509 aaKnown RBP22.18■■□□□ 1.14
PNKP-211ENST00000598020 GRIK3Q13003 919 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 GRIN2CQ14957 1233 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 KNOP1Q1ED39 458 aaKnown RBP22.18■■□□□ 1.14
PNKP-211ENST00000598020 DEFB123Q8N688 67 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 POMGNT1Q8WZA1 660 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 P2RX5Q93086 422 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 NRDE2Q9H7Z3 1164 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 PLEKHA5Q9HAU0 1116 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 HCSTQ9UBK5 93 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 AGO2Q9UKV8 859 aaKnown RBP22.18■■□□□ 1.14
PNKP-211ENST00000598020 CHD9Q3L8U1 2897 aa22.18■■□□□ 1.14
PNKP-211ENST00000598020 PTGESO14684 152 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 KIF20AO95235 890 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 POMCP01189 267 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 ADRB2P07550 413 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 SCNN1GP51170 649 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 OSTNP61366 133 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 RNASELQ05823 741 aaKnown RBP22.17■■□□□ 1.14
PNKP-211ENST00000598020 DSC1Q08554 894 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 COBLL1Q53SF7 1204 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 COLGALT1Q8NBJ5 622 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 TMEM174Q8WUU8 243 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 ARNTL2Q8WYA1 636 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 SNX27Q96L92 541 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 RPS6KC1Q96S38 1066 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 TMEM175Q9BSA9 504 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 MTMR10Q9NXD2 777 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 CPSF3Q9UKF6 684 aaKnown RBP22.17■■□□□ 1.14
PNKP-211ENST00000598020 PCDHB12Q9Y5F1 795 aa22.17■■□□□ 1.14
PNKP-211ENST00000598020 H3BNC9 293 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 MEFVO15553 781 aaPredicted RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 DDHD2O94830 711 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 LDHAP00338 332 aaKnown RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 KCNE1P15382 129 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 CTNNB1P35222 781 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 SLC10A6Q3KNW5 377 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 SPOUT1Q5T280 376 aaKnown RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 ZNF658Q5TYW1 1059 aaPredicted RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 KCNT2Q6UVM3 1135 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 Q7L0L9 218 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 ZNF280BQ86YH2 543 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 NELFCDQ8IXH7 590 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 C12orf56Q8IXR9 622 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 GUF1Q8N442 669 aaKnown RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 FBXO22Q8NEZ5 403 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 GOLGA5Q8TBA6 731 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 ERCC4Q92889 916 aaPredicted RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 ZNF558Q96NG5 402 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 TSPAN18Q96SJ8 248 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 C11orf84Q9BUA3 381 aaPredicted RBP22.16■■□□□ 1.14
PNKP-211ENST00000598020 CERS4Q9HA82 394 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 CNTN3Q9P232 1028 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 MTUS1Q9ULD2 1270 aa22.16■■□□□ 1.14
PNKP-211ENST00000598020 TTC26A0AVF1 554 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 EPOPA6NHQ4 379 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 THP07101 528 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 TNFSF9P41273 254 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 NAB2Q15742 525 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 SEZ6Q53EL9 994 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 ZBTB41Q5SVQ8 909 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 ARMCX5Q6P1M9 558 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms