RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 RAB27AP51159 221 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 SPAG1Q07617 926 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
SMCO4-206ENST00000596676 ZCWPW2Q504Y3 356 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 SLFN12LQ6IEE8 588 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 CENPPQ6IPU0 288 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 LRRC55Q6ZSA7 311 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 C11orf57Q6ZUT1 292 aaPredicted RBP16.92■□□□□ 0.3
SMCO4-206ENST00000596676 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 NELFBQ8WX92 580 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 P2RX5Q93086 422 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 CASD1Q96PB1 797 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 SLC9A7Q96T83 725 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 GAD1Q99259 594 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 ZBED2Q9BTP6 218 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
SMCO4-206ENST00000596676 HSPBP1Q9NZL4 362 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 FNDC1Q4ZHG4 1894 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 TBKBP1A7MCY6 615 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 NR3C1P04150 777 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 CXCL8P10145 99 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 SKIP12755 728 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 MLH1P40692 756 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 CBWD2Q8IUF1 395 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 PHOSPHO2Q8TCD6 241 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 ZNF689Q96CS4 500 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 PGBD4Q96DM1 585 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 GZF1Q9H116 711 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 RSAD1Q9HA92 442 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 CPSF3Q9UKF6 684 aaKnown RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
SMCO4-206ENST00000596676 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
SMCO4-206ENST00000596676 ARL5CA6NH57 179 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 TLL1O43897 1013 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 B4GALT3O60512 393 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 POMCP01189 267 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 ADRB2P07550 413 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 CCNE1P24864 410 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 SCNN1GP51170 649 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 HTRA4P83105 476 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-206ENST00000596676 TYRO3Q06418 890 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 SASS6Q6UVJ0 657 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 HS2ST1Q7LGA3 356 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 GSTCDQ8NEC7 633 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 SYAP1Q96A49 352 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-206ENST00000596676 ZMAT2Q96NC0 199 aaKnown RBP16.9■□□□□ 0.3
SMCO4-206ENST00000596676 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
SMCO4-206ENST00000596676 CCDC94Q9BW85 323 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-206ENST00000596676 RC3H2Q9HBD1 1191 aaKnown RBP16.9■□□□□ 0.3
SMCO4-206ENST00000596676 TRIOBPQ9H2D6 2365 aa16.89■□□□□ 0.3
SMCO4-206ENST00000596676 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 PTGESO14684 152 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 PSMA7O14818 248 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 CALUO43852 315 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-206ENST00000596676 KIF20AO95235 890 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 CLTAP09496 248 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 STIM1Q13586 685 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 SCARA3Q6AZY7 606 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 TTI2Q6NXR4 508 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 ZNF280BQ86YH2 543 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 C12orf56Q8IXR9 622 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 GPD1LQ8N335 351 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 PLEKHO2Q8TD55 490 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 RABGGTAQ92696 567 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 DHTKD1Q96HY7 919 aaPredicted RBP16.89■□□□□ 0.29
SMCO4-206ENST00000596676 SNX27Q96L92 541 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 YME1L1Q96TA2 773 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 FUCA2Q9BTY2 467 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 DNAJC25Q9H1X3 360 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
SMCO4-206ENST00000596676 ANK1P16157 1881 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 CITO14578 2027 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 EXTL3O43909 919 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 DDHD2O94830 711 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 NR2F2P24468 414 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 PAK1Q13153 545 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 NOMO2Q5JPE7 1267 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 GLB1LQ6UWU2 654 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 APBB1IPQ7Z5R6 666 aaPredicted RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 MLKLQ8NB16 471 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 RAD9AQ99638 391 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 PBX4Q9BYU1 374 aa16.88■□□□□ 0.29
SMCO4-206ENST00000596676 GTPBP4Q9BZE4 634 aaKnown RBP16.88■□□□□ 0.29
SMCO4-206ENST00000596676 TMEM117Q9H0C3 514 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms