RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 GLB1LQ6UWU2 654 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 C12orf56Q8IXR9 622 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 ACAP3Q96P50 834 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 SEMA6BQ9H3T3 888 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
DDX49-204ENST00000595858 CLTAP09496 248 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 TNFSF9P41273 254 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 CENPPQ6IPU0 288 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 HELQQ8TDG4 1101 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 DHTKD1Q96HY7 919 aaPredicted RBP16.31■□□□□ 0.2
DDX49-204ENST00000595858 GAD1Q99259 594 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 HSPBP1Q9NZL4 362 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
DDX49-204ENST00000595858 TBKBP1A7MCY6 615 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 PSMA7O14818 248 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 KIAA0391O15091 583 aaKnown RBP16.3■□□□□ 0.2
DDX49-204ENST00000595858 LDHAP00338 332 aaKnown RBP16.3■□□□□ 0.2
DDX49-204ENST00000595858 ACOT2P49753 483 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 AFF1P51825 1210 aaKnown RBP16.3■□□□□ 0.2
DDX49-204ENST00000595858 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
DDX49-204ENST00000595858 NLRP12P59046 1061 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 ZCWPW2Q504Y3 356 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 CRELD2Q6UXH1 353 aaPredicted RBP16.3■□□□□ 0.2
DDX49-204ENST00000595858 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 SAAL1Q96ER3 474 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 ZFP42Q96MM3 310 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 DMAC2Q9NW81 257 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 CPSF3Q9UKF6 684 aaKnown RBP16.3■□□□□ 0.2
DDX49-204ENST00000595858 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 LAMA3Q16787 3333 aa16.3■□□□□ 0.2
DDX49-204ENST00000595858 GOLGA8IPA6NC78 632 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 ARL5CA6NH57 179 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 GOLGA8JA6NMD2 632 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 CALUO43852 315 aaPredicted RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 MYOGP15173 224 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 PBX2P40425 430 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 MLH1P40692 756 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 CYP2J2P51589 502 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 SLC10A6Q3KNW5 377 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 PAN2Q504Q3 1202 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 NOMO2Q5JPE7 1267 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 TMEM174Q8WUU8 243 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 P2RX5Q93086 422 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 PBX4Q9BYU1 374 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 TOPORSQ9NS56 1045 aaPredicted RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 INPP5FQ9Y2H2 1132 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 INPPL1O15357 1258 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 EXTL3O43909 919 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 CXCL8P10145 99 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 CCNE1P24864 410 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 SMAD3P84022 425 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 SLC9A9Q8IVB4 645 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 CMTR2Q8IYT2 770 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 GPD1LQ8N335 351 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 XXYLT1Q8NBI6 393 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 FBXL18Q96ME1 805 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 CXCL16Q9H2A7 254 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 RPF1Q9H9Y2 349 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 MIOSQ9NXC5 875 aa16.29■□□□□ 0.2
DDX49-204ENST00000595858 LAMA2P24043 3122 aaKnown RBP16.29■□□□□ 0.2
DDX49-204ENST00000595858 LCHNA4D1U4 455 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 NR3C1P04150 777 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
DDX49-204ENST00000595858 BTG3Q14201 252 aaPredicted RBP16.28■□□□□ 0.2
DDX49-204ENST00000595858 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 RAB30Q15771 203 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 NFIL3Q16649 462 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 XKR4Q5GH76 650 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
DDX49-204ENST00000595858 NOC3LQ8WTT2 800 aaKnown RBP16.28■□□□□ 0.2
DDX49-204ENST00000595858 NELFBQ8WX92 580 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 KIAA1586Q9HCI6 787 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 KANSL3Q9P2N6 904 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
DDX49-204ENST00000595858 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
DDX49-204ENST00000595858 COL4A6Q14031 1691 aa16.27■□□□□ 0.2
DDX49-204ENST00000595858 TTC26A0AVF1 554 aa16.27■□□□□ 0.2
DDX49-204ENST00000595858 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.2
DDX49-204ENST00000595858 LETM1O95202 739 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms