RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 EFHBQ8N7U6 833 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 VN1R2Q8NFZ6 395 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 DDX12PQ92771 950 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 TMEM169Q96HH4 297 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 IGFLR1Q9H665 355 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 ENTPD7Q9NQZ7 604 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 CLDND1Q9NY35 253 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 RCOR1Q9UKL0 485 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 GDAQ9Y2T3 454 aa12.06□□□□□ -0.48
SHKBP1-206ENST00000595523 C2orf71A6NGG8 1288 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 K7ENM7 598 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 TRAK2O60296 914 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 TBCAO75347 108 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 NMT1P30419 496 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 GRM5P41594 1212 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 OR1G1P47890 313 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 STRN3Q13033 797 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 KCNC3Q14003 757 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 DUSP6Q16828 381 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 LEXMQ3ZCV2 418 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 PDE12Q6L8Q7 609 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 SLC39A4Q6P5W5 647 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 MPZL3Q6UWV2 235 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 ZPBP2Q6X784 338 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 TMC7Q7Z402 723 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 SFR1Q86XK3 245 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 VPS52Q8N1B4 723 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 MICAL1Q8TDZ2 1067 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 AUTS2Q8WXX7 1259 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 RABGGTAQ92696 567 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 PAAF1Q9BRP4 392 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 CLEC1BQ9P126 229 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 KCNG1Q9UIX4 513 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 TBX20Q9UMR3 447 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 FAN1Q9Y2M0 1017 aa12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 PRG3Q9Y2Y8 225 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-206ENST00000595523 FRMD3A2A2Y4 597 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 NCK2O43639 380 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 FAM189A1O60320 539 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 TOM1L1O75674 476 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 PPP1R37O75864 691 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 PIGRP01833 764 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ALDH2P05091 517 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 CTSAP10619 480 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 MCF2P10911 925 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ME1P48163 572 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 OSTNP61366 133 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 GTF2BQ00403 316 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 MCL1Q07820 350 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 NOLC1Q14978 699 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 AAK1Q2M2I8 961 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ZC2HC1CQ53FD0 456 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 XKR4Q5GH76 650 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 GLRA4Q5JXX5 417 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 RESP18Q5W5W9 173 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ALKAL1Q6UXT8 129 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 EP400NLQ6ZTU2 488 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 FAM178BQ8IXR5 827 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 MRPL43Q8N983 215 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 LEO1Q8WVC0 666 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 STAMQ92783 540 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 MSLNLQ96KJ4 702 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 NECAB3Q96P71 396 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 RPS6KC1Q96S38 1066 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 STRA6Q9BX79 667 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 FGFBP2Q9BYJ0 223 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ST6GALNAC4Q9H4F1 302 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ZHX3Q9H4I2 956 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 TLE6Q9H808 572 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 KBTBD4Q9NVX7 518 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 ANKFY1Q9P2R3 1169 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 IRAK3Q9Y616 596 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 SCN1AP35498 2009 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 DOCK6Q96HP0 2047 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 DENND4AQ7Z401 1863 aa12.04□□□□□ -0.48
SHKBP1-206ENST00000595523 TISP43B9A030 160 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 H0YCG3 227 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 DLL1O00548 723 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 LILRB3O75022 631 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 THP07101 528 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 SOX4Q06945 474 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 TUSC3Q13454 348 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 BECN1Q14457 450 aa12.03□□□□□ -0.48
SHKBP1-206ENST00000595523 SMC1AQ14683 1233 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms