RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 IYDQ6PHW0 289 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 UNC13DQ70J99 1090 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 KIAA2013Q8IYS2 634 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 SUPT20HQ8NEM7 779 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 SREK1Q8WXA9 508 aaKnown RBP13.06□□□□□ -0.32
LIG1-207ENST00000594759 RFFLQ8WZ73 363 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 DGCR14Q96DF8 476 aaKnown RBP13.06□□□□□ -0.32
LIG1-207ENST00000594759 ZNF317Q96PQ6 595 aaPredicted RBP13.06□□□□□ -0.32
LIG1-207ENST00000594759 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
LIG1-207ENST00000594759 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 SMCO2A6NFE2 343 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 PTK2Q05397 1052 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 PDIA5Q14554 519 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 EARS2Q5JPH6 523 aaKnown RBP13.06□□□□□ -0.32
LIG1-207ENST00000594759 PDXDC2PQ6P474 469 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 PHF20Q9BVI0 1012 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 OSBPL8Q9BZF1 889 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 RPL26L1Q9UNX3 145 aaKnown RBP13.06□□□□□ -0.32
LIG1-207ENST00000594759 USTQ9Y2C2 406 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 NUB1Q9Y5A7 615 aa13.06□□□□□ -0.32
LIG1-207ENST00000594759 RIPK2O43353 540 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 GALCP54803 685 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 CAV1Q03135 178 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 AP1B1Q10567 949 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 MFSD14BQ5SR56 506 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 HP1BP3Q5SSJ5 553 aaPredicted RBP13.05□□□□□ -0.32
LIG1-207ENST00000594759 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 RHOT2Q8IXI1 618 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 PROM2Q8N271 834 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
LIG1-207ENST00000594759 SENP1Q9P0U3 644 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 GCNT4Q9P109 453 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 AUHQ13825 339 aaKnown RBP13.05□□□□□ -0.32
LIG1-207ENST00000594759 TSHZ1Q6ZSZ6 1077 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 CCDC89Q8N998 374 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 NAT14Q8WUY8 206 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 CCT7Q99832 543 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 MRPL1Q9BYD6 325 aaKnown RBP13.05□□□□□ -0.32
LIG1-207ENST00000594759 PEX11AO75192 247 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 NUDT17P0C025 328 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 NOP14P78316 857 aaKnown RBP13.05□□□□□ -0.32
LIG1-207ENST00000594759 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 RARS2Q5T160 578 aaKnown RBP13.05□□□□□ -0.32
LIG1-207ENST00000594759 GPBP1Q86WP2 473 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 GLYCTKQ8IVS8 523 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 TRIM59Q8IWR1 403 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 DDI1Q8WTU0 396 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 ZNF333Q96JL9 665 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 TSSK1BQ9BXA7 367 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 MEGF6O75095 1541 aa13.05□□□□□ -0.32
LIG1-207ENST00000594759 FAM13AO94988 1023 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 TMPRSS15P98073 1019 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 ZNF572Q7Z3I7 529 aaPredicted RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 EXOC3L1Q86VI1 746 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 LRRC6Q86X45 466 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 SYN2Q92777 582 aaPredicted RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 TLCD1Q96CP7 247 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 CCDC28BQ9BUN5 200 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 NEUROG2Q9H2A3 272 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 CDC42EP4Q9H3Q1 356 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 LRRN2O75325 713 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 DDAH1O94760 285 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 LCA5LO95447 670 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 APOEP02649 317 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 INHBAP08476 426 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 MCF2P10911 925 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 CDK7P50613 346 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 STAT2P52630 851 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 RTP1P59025 263 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 LMNB2Q03252 620 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 KRT17Q04695 432 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 KHDC1Q4VXA5 237 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 ENAHQ8N8S7 591 aaPredicted RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 C1orf54Q8WWF1 131 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 SNF8Q96H20 258 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 MTO1Q9Y2Z2 717 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 ZNF804BA4D1E1 1349 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 UTYO14607 1347 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 NPHP3-ACAD11A0A0J9YXS1 232 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 A8MXQ7 604 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 CES2O00748 559 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 XPO1O14980 1071 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 EXOC3O60645 756 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 KITP10721 976 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 KRT10P13645 584 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 EEF1DP29692 281 aaKnown RBP13.04□□□□□ -0.32
LIG1-207ENST00000594759 SCNN1DP51172 638 aa13.04□□□□□ -0.32
LIG1-207ENST00000594759 TPD52P55327 224 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms