RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SLC16A3O15427 465 aaKnown RBP16.55■□□□□ 0.24
PNKP-204ENST00000594661 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 PSAPP07602 524 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 PLS3P13797 630 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 ICAM3P32942 547 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 ABHD15Q6UXT9 468 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
PNKP-204ENST00000594661 FAM133AQ8N9E0 248 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 LMCD1Q9NZU5 365 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 STIM2Q9P246 746 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 LRRC37A2A6NM11 1700 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 ZNF185O15231 689 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 PYGLP06737 847 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 ALADP13716 330 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 EDNRBP24530 442 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 NFIL3Q16649 462 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 TDRD12Q587J7 1177 aaKnown RBP16.55■□□□□ 0.24
PNKP-204ENST00000594661 SFMBT2Q5VUG0 894 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 MTHFD1LQ6UB35 978 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 SPATA21Q7Z572 469 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 CACNA2D3Q8IZS8 1091 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
PNKP-204ENST00000594661 PAPOLBQ9NRJ5 636 aaKnown RBP16.55■□□□□ 0.24
PNKP-204ENST00000594661 AGPAT3Q9NRZ7 376 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 ARID2Q68CP9 1835 aa16.55■□□□□ 0.24
PNKP-204ENST00000594661 LCA5LO95447 670 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 PGK2P07205 417 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 GSTA1P08263 222 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 IMPDH2P12268 514 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 OSBPP22059 807 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 CREG2Q8IUH2 290 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 PIK3R5Q8WYR1 880 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 ATP6V0A1Q93050 837 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 LUC7L3O95232 432 aaKnown RBP16.54■□□□□ 0.24
PNKP-204ENST00000594661 SLC25A27O95847 323 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
PNKP-204ENST00000594661 XRCC5P13010 732 aaKnown RBP16.54■□□□□ 0.24
PNKP-204ENST00000594661 PRKCEQ02156 737 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
PNKP-204ENST00000594661 FAM102BQ5T8I3 360 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 HGSNATQ68CP4 663 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 HIBCHQ6NVY1 386 aaPredicted RBP16.54■□□□□ 0.24
PNKP-204ENST00000594661 HS2ST1Q7LGA3 356 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 APLFQ8IW19 511 aaPredicted RBP16.54■□□□□ 0.24
PNKP-204ENST00000594661 SLC10A4Q96EP9 437 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 TIPINQ9BVW5 301 aa16.54■□□□□ 0.24
PNKP-204ENST00000594661 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 AFPP02771 609 aaKnown RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 PAEPP09466 180 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 MAGEA1P43355 309 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 CYP2J2P51589 502 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 PEX3P56589 373 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 SOX10P56693 466 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 GFPT1Q06210 699 aaPredicted RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 QPCTQ16769 361 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 RBM12BQ8IXT5 1001 aaKnown RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 GALNT15Q8N3T1 639 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 B4GALNT2Q8NHY0 566 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 SYN2Q92777 582 aaPredicted RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 CEP170P1Q96L14 293 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 FGD4Q96M96 766 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 PPANQ9NQ55 473 aaKnown RBP16.53■□□□□ 0.24
PNKP-204ENST00000594661 DMAC2Q9NW81 257 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 ZFATQ9P243 1243 aa16.53■□□□□ 0.24
PNKP-204ENST00000594661 TISP43B9A030 160 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 TLR2O60603 784 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 SERPING1P05155 500 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 CYP2C8P10632 490 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 ASTE1Q2TB18 679 aaPredicted RBP16.52■□□□□ 0.24
PNKP-204ENST00000594661 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 FAM186BQ8IYM0 893 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 SYNGAP1Q96PV0 1343 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.52■□□□□ 0.241e-7■■■□□ 14.9
PNKP-204ENST00000594661 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
PNKP-204ENST00000594661 SLC12A6Q9UHW9 1150 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 IGSF9BQ9UPX0 1349 aa16.52■□□□□ 0.24
PNKP-204ENST00000594661 SLC16A4O15374 487 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 PRLRP16471 622 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 ATP4AP20648 1035 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.23
PNKP-204ENST00000594661 ARMC3Q5W041 872 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 EEPD1Q7L9B9 569 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 HAUS6Q7Z4H7 955 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 SPATA4Q8NEY3 305 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 TSC22D3Q99576 134 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 EPAS1Q99814 870 aa16.52■□□□□ 0.23
PNKP-204ENST00000594661 GANQ9H2C0 597 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms