RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SUFUQ9UMX1 484 aa17.7■□□□□ 0.42
LIG1-206ENST00000594067 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 GZMAP12544 262 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 QARSP47897 775 aaKnown RBP17.69■□□□□ 0.42
LIG1-206ENST00000594067 GTF2BQ00403 316 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 TNIP1Q15025 636 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 CCDC25Q86WR0 208 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 VEZTQ9HBM0 779 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 ZNF70Q9UC06 446 aaPredicted RBP17.69■□□□□ 0.42
LIG1-206ENST00000594067 MTA2O94776 668 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 GGPS1O95749 300 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 YWHABP31946 246 aaKnown RBP17.69■□□□□ 0.42
LIG1-206ENST00000594067 HSD17B4P51659 736 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 UGCGQ16739 394 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 NBPF9Q3BBW0 867 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 FAM151AQ8WW52 585 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 AGO4Q9HCK5 861 aaKnown RBP17.69■□□□□ 0.42
LIG1-206ENST00000594067 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 DBR1Q9UK59 544 aaKnown RBP17.69■□□□□ 0.42
LIG1-206ENST00000594067 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 SLC12A4Q9UP95 1085 aa17.69■□□□□ 0.42
LIG1-206ENST00000594067 COL2A1P02458 1487 aaPredicted RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 EZRP15311 586 aaKnown RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 SLC8A1P32418 973 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 SIX1Q15475 284 aaPredicted RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 TKFCQ3LXA3 575 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 HIBCHQ6NVY1 386 aaPredicted RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 LRRC34Q8IZ02 419 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 ANKS4BQ8N8V4 417 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 KIFC3Q9BVG8 833 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 MTFR1LQ9H019 292 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 TOPORSQ9NS56 1045 aaPredicted RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 MTUS1Q9ULD2 1270 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 ZNF646O15015 1829 aaPredicted RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 RIPK2O43353 540 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 CALCAP01258 141 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 CAP2P40123 477 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 MFAP3P55082 362 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 ITIH4Q14624 930 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 PPP1R7Q15435 360 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 C6orf118Q5T5N4 469 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 FAM102BQ5T8I3 360 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 STYK1Q6J9G0 422 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 SHC3Q92529 594 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 TMEM39BQ9GZU3 492 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 CNOT7Q9UIV1 285 aaKnown RBP17.68■□□□□ 0.42
LIG1-206ENST00000594067 CEP83Q9Y592 693 aa17.68■□□□□ 0.42
LIG1-206ENST00000594067 KIF1CO43896 1103 aaKnown RBP17.67■□□□□ 0.42
LIG1-206ENST00000594067 ATP6V1G2O95670 118 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 CYP1A2P05177 515 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 CYP11B1P15538 503 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
LIG1-206ENST00000594067 ADCY2Q08462 1091 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 SNRNP35Q16560 246 aaKnown RBP17.67■□□□□ 0.42
LIG1-206ENST00000594067 CYP1B1Q16678 543 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 PLA2G4FQ68DD2 849 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 RNF207Q6ZRF8 634 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 CPXCR1Q8N123 301 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 MORC4Q8TE76 937 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 DHX38Q92620 1227 aaKnown RBP17.67■□□□□ 0.42
LIG1-206ENST00000594067 HOMER2Q9NSB8 354 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 ZNF536O15090 1300 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 CLDN3O15551 220 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 DLATP10515 647 aaKnown RBP17.67■□□□□ 0.42
LIG1-206ENST00000594067 ADSSP30520 456 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 GBP1P32455 592 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 CCDC38Q502W7 563 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 C1orf54Q8WWF1 131 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 ART4Q93070 314 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 NOD2Q9HC29 1040 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 CNTNAP1P78357 1384 aa17.67■□□□□ 0.42
LIG1-206ENST00000594067 PLA2G6O60733 806 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 AGTP01019 485 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 ICAM1P05362 532 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 GSTA1P08263 222 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 RWDD2BP57060 319 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 DLGAP5Q15398 846 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 TLDC1Q6P9B6 456 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 TMEM174Q8WUU8 243 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 PRMT1Q99873 361 aaKnown RBP17.66■□□□□ 0.42
LIG1-206ENST00000594067 CCDC134Q9H6E4 229 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 INTS9Q9NV88 658 aaKnown RBP17.66■□□□□ 0.42
LIG1-206ENST00000594067 GTF3C4Q9UKN8 822 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
LIG1-206ENST00000594067 PASKQ96RG2 1323 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 RASGRF2O14827 1237 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 RAD17O75943 681 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 RARGP13631 454 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 PSEN1P49768 467 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 PDE6CP51160 858 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 SNX1Q13596 522 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 MTMR1Q13613 665 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 SLMAPQ14BN4 828 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 KRT39Q6A163 491 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 HELQQ8TDG4 1101 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 TAS1R2Q8TE23 839 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
LIG1-206ENST00000594067 MIEF2Q96C03 454 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms