RNA–Protein interactions for RNA: ENST00000594066.1

BRD4-204, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-204ENST00000594066 UBXN11Q5T124 520 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 IRF7Q92985 503 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 LENG9Q96B70 501 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 BRD9Q9H8M2 597 aa13.15□□□□□ -0.3
BRD4-204ENST00000594066 CCL16O15467 120 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 PSMD10O75832 226 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 RPL17P18621 184 aaKnown RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 LIMK1P53667 647 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 COL9A2Q14055 689 aaPredicted RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 HSP90AA2PQ14568 343 aaPredicted RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 PSMD5Q16401 504 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 Q4G0T1 1027 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 AASDHQ4L235 1098 aaPredicted RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 C12orf50Q8NA57 414 aaPredicted RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 B3GALT6Q96L58 329 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 HEBP1Q9NRV9 189 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 NDRG2Q9UN36 371 aaKnown RBP13.14□□□□□ -0.31
BRD4-204ENST00000594066 ZMYM2Q9UBW7 1377 aa13.14□□□□□ -0.31
BRD4-204ENST00000594066 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 ZNF197O14709 1029 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 PROS1P07225 676 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
BRD4-204ENST00000594066 PMLP29590 882 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 NTHL1P78549 312 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 LRRC32Q14392 662 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
BRD4-204ENST00000594066 FAM171A1Q5VUB5 890 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 ANO5Q75V66 913 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 CEP68Q76N32 757 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 NPAS3Q8IXF0 933 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 ITFG1Q8TB96 612 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 SLC7A14Q8TBB6 771 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 FAM3CQ92520 227 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 ZFP42Q96MM3 310 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 SH2D3AQ9BRG2 576 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 TRMT61BQ9BVS5 477 aaKnown RBP13.13□□□□□ -0.31
BRD4-204ENST00000594066 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
BRD4-204ENST00000594066 LMAN1LQ9HAT1 526 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 ZFP14Q9HCL3 533 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
BRD4-204ENST00000594066 ZFHX4Q86UP3 3567 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
BRD4-204ENST00000594066 STBD1O95210 358 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 PTPN2P17706 415 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 TUSC3Q13454 348 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 KRT32Q14532 448 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
BRD4-204ENST00000594066 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 LONP2Q86WA8 852 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
BRD4-204ENST00000594066 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 AVENQ9NQS1 362 aaPredicted RBP13.12□□□□□ -0.31
BRD4-204ENST00000594066 PARP2Q9UGN5 583 aa13.12□□□□□ -0.31
BRD4-204ENST00000594066 TMEM150BA6NC51 233 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 LRG1P02750 347 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 P4HBP07237 508 aaKnown RBP13.11□□□□□ -0.31
BRD4-204ENST00000594066 ELF1P32519 619 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 MLLT6P55198 1093 aaPredicted RBP13.11□□□□□ -0.31
BRD4-204ENST00000594066 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 FZD5Q13467 585 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 RAB33AQ14088 237 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
BRD4-204ENST00000594066 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
BRD4-204ENST00000594066 MCRS1Q96EZ8 462 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
BRD4-204ENST00000594066 MINDY3Q9H8M7 445 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
BRD4-204ENST00000594066 CYP3A7-CYP3A51PA0A087WV96 503 aa13.1□□□□□ -0.31
BRD4-204ENST00000594066 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
BRD4-204ENST00000594066 TSPAN1O60635 241 aa13.1□□□□□ -0.31
BRD4-204ENST00000594066 MICAL2O94851 1124 aa13.1□□□□□ -0.31
BRD4-204ENST00000594066 TDGF1P13385 188 aa13.1□□□□□ -0.31
BRD4-204ENST00000594066 CYP3A7P24462 503 aa13.1□□□□□ -0.31
BRD4-204ENST00000594066 ADD1P35611 737 aaKnown RBP13.1□□□□□ -0.31
BRD4-204ENST00000594066 NLRP5P59047 1200 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms