RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 VPS45Q9NRW7 570 aa4.81□□□□□ -1.64
LINC00649-204ENST00000593977 FAM105AQ9NUU6 356 aa4.81□□□□□ -1.64
LINC00649-204ENST00000593977 NKIRAS2Q9NYR9 191 aa4.81□□□□□ -1.64
LINC00649-204ENST00000593977 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.81□□□□□ -1.64
LINC00649-204ENST00000593977 FBXL21Q9UKT6 434 aa4.81□□□□□ -1.64
LINC00649-204ENST00000593977 ZMYND8Q9ULU4 1186 aaPredicted RBP4.81□□□□□ -1.64
LINC00649-204ENST00000593977 ACTL7BQ9Y614 415 aa4.81□□□□□ -1.64
LINC00649-204ENST00000593977 KIF20BQ96Q89 1820 aa4.81□□□□□ -1.64
LINC00649-204ENST00000593977 COL15A1P39059 1388 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 RIF1Q5UIP0 2472 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 KRBA1A5PL33 1030 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 WDR64B1ANS9 1081 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 H7C1D1 291 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 AQP7O14520 342 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 TUSC2O75896 110 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SLURP2P0DP57 97 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 FOSL2P15408 326 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 ATP2A2P16615 1042 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 RPS6KB1P23443 525 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 TNFSF4P23510 183 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 PIK3CBP42338 1070 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SCAND1P57086 179 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SESN3P58005 492 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 AMPD2Q01433 879 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 NEXNQ0ZGT2 675 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 CLUL1Q15846 466 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SLC10A5Q5PT55 438 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 ATAT1Q5SQI0 421 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SLC35F1Q5T1Q4 408 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 ITPRIPL1Q6GPH6 555 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 KRTAP1-3Q8IUG1 177 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 GRAMD1CQ8IYS0 662 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 FIBCD1Q8N539 461 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 ZNF713Q8N859 430 aaPredicted RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 CNBD1Q8NA66 436 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 IPO4Q8TEX9 1081 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SLC5A5Q92911 643 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 DCPSQ96C86 337 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 C1orf159Q96HA4 380 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 PPP1R16BQ96T49 567 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 MIPEPQ99797 713 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 CHCHD6Q9BRQ6 235 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 TTYH1Q9H313 450 aaPredicted RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 NOL6Q9H6R4 1146 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 GGA3Q9NZ52 723 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 ZKSCAN5Q9Y2L8 839 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 SF3B6Q9Y3B4 125 aaKnown RBP4.8□□□□□ -1.64
LINC00649-204ENST00000593977 DCHS1Q96JQ0 3298 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 NAV2Q8IVL1 2488 aa4.8□□□□□ -1.64
LINC00649-204ENST00000593977 CLSPNQ9HAW4 1339 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 ANKRD18BA2A2Z9 1011 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 RNF225M0QZC1 329 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 EIF3FO00303 357 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 IGF2BP3O00425 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 NCK2O43639 380 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 HNRNPCP07910 306 aaKnown RBP eCLIP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 CYP19A1P11511 503 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 ITIH2P19823 946 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 CYP7A1P22680 504 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 GPR3P46089 330 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 KPNA1P52294 538 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 INHBEP58166 350 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 CACNB2Q08289 660 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 CRHR2Q13324 411 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 BLMHQ13867 455 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 PPP2R5DQ14738 602 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 ANO4Q32M45 955 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 DARS2Q6PI48 645 aaKnown RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 DPP9Q86TI2 863 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 C11orf74Q86VG3 221 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 DNAJC10Q8IXB1 793 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 LMNTD2Q8IXW0 634 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 FTSJ3Q8IY81 847 aaKnown RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 TMEM130Q8N3G9 435 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 IGSF22Q8N9C0 903 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 SLC30A5Q8TAD4 765 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 DCAF4Q8WV16 495 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 JADE3Q92613 823 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 DPF2Q92785 391 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 BRF1Q92994 677 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 USP13Q92995 863 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 TMEM169Q96HH4 297 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 COX4I2Q96KJ9 171 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 PRDM14Q9GZV8 571 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 TMEM60Q9H2L4 133 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 ACSS3Q9H6R3 686 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 CERS4Q9HA82 394 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 DMRT3Q9NQL9 472 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 HELLSQ9NRZ9 838 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 H2AFY2Q9P0M6 372 aaPredicted RBP4.79□□□□□ -1.64
LINC00649-204ENST00000593977 ZNF652Q9Y2D9 606 aa4.79□□□□□ -1.64
LINC00649-204ENST00000593977 RTL1A6NKG5 1358 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 RAB3GAP2Q9H2M9 1393 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 SSC5DA1L4H1 1573 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 EVC2Q86UK5 1308 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TJP1Q07157 1748 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms