RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 EIF4BP23588 611 aaKnown RBP22.57■■□□□ 1.2
PNKP-203ENST00000593946 WNT7BP56706 349 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 KLHDC7AQ5VTJ3 777 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 SERINC5Q86VE9 423 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 CDR2LQ86X02 465 aaPredicted RBP22.57■■□□□ 1.2
PNKP-203ENST00000593946 BRSK2Q8IWQ3 736 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 LMO3Q8TAP4 145 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 TMEM8AQ9HCN3 771 aa22.57■■□□□ 1.2
PNKP-203ENST00000593946 TOPORSQ9NS56 1045 aaPredicted RBP22.57■■□□□ 1.2
PNKP-203ENST00000593946 CPSF3Q9UKF6 684 aaKnown RBP22.57■■□□□ 1.2
PNKP-203ENST00000593946 DLATP10515 647 aaKnown RBP22.56■■□□□ 1.2
PNKP-203ENST00000593946 UCHL3P15374 230 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 TNFSF9P41273 254 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 POLR2FP61218 127 aaKnown RBP22.56■■□□□ 1.2
PNKP-203ENST00000593946 CETN1Q12798 172 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 MEA1Q16626 185 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 EPC2Q52LR7 807 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 SEZ6Q53EL9 994 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 CACNA2D4Q7Z3S7 1137 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 DNAJC5GQ8N7S2 189 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 CPB2Q96IY4 423 aa22.56■■□□□ 1.2
PNKP-203ENST00000593946 A0A1B0GUA9 196 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 MCF2P10911 925 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 HNRNPH3P31942 346 aaKnown RBP22.55■■□□□ 1.2
PNKP-203ENST00000593946 CRYBB1P53674 252 aaPredicted RBP22.55■■□□□ 1.2
PNKP-203ENST00000593946 ITGA7Q13683 1181 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 SNX17Q15036 470 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 KRT39Q6A163 491 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 WDR59Q6PJI9 974 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 TMEM40Q8WWA1 233 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 INTS2Q9H0H0 1204 aaKnown RBP22.55■■□□□ 1.2
PNKP-203ENST00000593946 PDE11AQ9HCR9 933 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 PLAGL2Q9UPG8 496 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 COQ4Q9Y3A0 265 aa22.55■■□□□ 1.2
PNKP-203ENST00000593946 ZNF500O60304 480 aaPredicted RBP22.54■■□□□ 1.2
PNKP-203ENST00000593946 FGFR4P22455 802 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 TSR1Q2NL82 804 aaKnown RBP22.54■■□□□ 1.2
PNKP-203ENST00000593946 PDXDC1Q6P996 788 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 RPAINQ86UA6 219 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 FNBP1Q96RU3 617 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 NLRC4Q9NPP4 1024 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 TRIP11Q15643 1979 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 LRRC53A6NM62 1247 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 RPLP2P05387 115 aaKnown RBP22.54■■□□□ 1.2
PNKP-203ENST00000593946 HOXA11P31270 313 aaPredicted RBP22.54■■□□□ 1.2
PNKP-203ENST00000593946 PTPN11Q06124 597 aaPredicted RBP22.54■■□□□ 1.2
PNKP-203ENST00000593946 C15orf39Q6ZRI6 1047 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 SV2AQ7L0J3 742 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 RRAGAQ7L523 313 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 CATSPER4Q7RTX7 472 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 TMTC1Q8IUR5 882 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 THNSL1Q8IYQ7 743 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 CEP120Q8N960 986 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 ARRDC4Q8NCT1 418 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 EHBP1Q8NDI1 1231 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 WNT8BQ93098 351 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 GLT1D1Q96MS3 346 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 CGRRF1Q99675 332 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 UNC93B1Q9H1C4 597 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 FHOD1Q9Y613 1164 aa22.54■■□□□ 1.2
PNKP-203ENST00000593946 PTPRJQ12913 1337 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 RALGAPA2Q2PPJ7 1873 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 MRPS6P82932 125 aaKnown RBP22.53■■□□□ 1.2
PNKP-203ENST00000593946 E4F1Q66K89 784 aaPredicted RBP22.53■■□□□ 1.2
PNKP-203ENST00000593946 CYP26C1Q6V0L0 522 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 RSPH3Q86UC2 560 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 C17orf53Q8N3J3 647 aaPredicted RBP22.53■■□□□ 1.2
PNKP-203ENST00000593946 ZNF516Q92618 1163 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 VTI1AQ96AJ9 217 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 CELF4Q9BZC1 486 aaKnown RBP22.53■■□□□ 1.2
PNKP-203ENST00000593946 NUCKS1Q9H1E3 243 aaKnown RBP22.53■■□□□ 1.2
PNKP-203ENST00000593946 PAK6Q9NQU5 681 aaPredicted RBP22.53■■□□□ 1.2
PNKP-203ENST00000593946 DAAM1Q9Y4D1 1078 aa22.53■■□□□ 1.2
PNKP-203ENST00000593946 SOWAHDA6NJG2 315 aa22.52■■□□□ 1.2
PNKP-203ENST00000593946 PTGISQ16647 500 aa22.52■■□□□ 1.2
PNKP-203ENST00000593946 SLC9C1Q4G0N8 1177 aa22.52■■□□□ 1.2
PNKP-203ENST00000593946 SYN2Q92777 582 aaPredicted RBP22.52■■□□□ 1.2
PNKP-203ENST00000593946 ZNHIT6Q9NWK9 470 aaKnown RBP22.52■■□□□ 1.2
PNKP-203ENST00000593946 APEX2Q9UBZ4 518 aa22.52■■□□□ 1.2
PNKP-203ENST00000593946 A0A1W2PQ45 241 aaPredicted RBP22.51■■□□□ 1.19
PNKP-203ENST00000593946 A0A1W2PQY0 241 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 TNNI1P19237 187 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 CDK17Q00537 523 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 POU5F1Q01860 360 aaKnown RBP22.51■■□□□ 1.19
PNKP-203ENST00000593946 NCBP1Q09161 790 aaKnown RBP22.51■■□□□ 1.19
PNKP-203ENST00000593946 ENOX2Q16206 610 aaKnown RBP22.51■■□□□ 1.19
PNKP-203ENST00000593946 FBXL13Q8NEE6 735 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 CHP1Q99653 195 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 ADPGKQ9BRR6 497 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 KCND1Q9NSA2 647 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 AJAP1Q9UKB5 411 aaPredicted RBP22.51■■□□□ 1.19
PNKP-203ENST00000593946 MYO6Q9UM54 1294 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 M0QZ92 97 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 AXLP30530 894 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 SURF1Q15526 300 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 KYAT1Q16773 422 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 ZACNQ401N2 412 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 LMBRD2Q68DH5 695 aaPredicted RBP22.51■■□□□ 1.19
PNKP-203ENST00000593946 IQCEQ6IPM2 695 aa22.51■■□□□ 1.19
PNKP-203ENST00000593946 RAD9BQ6WBX8 426 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms