RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 NNTQ13423 1086 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 TARBP2Q15633 366 aaKnown RBP21.22■□□□□ 0.99
CLIP3-206ENST00000593074 FAM160B1Q5W0V3 765 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 AFAP1L1Q8TED9 768 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 SLC7A3Q8WY07 619 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 SEPT1Q8WYJ6 367 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 PCDHB18PQ96TA0 734 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 TTC7AQ9ULT0 858 aaPredicted RBP21.22■□□□□ 0.99
CLIP3-206ENST00000593074 DDX3YO15523 660 aaKnown RBP21.22■□□□□ 0.99
CLIP3-206ENST00000593074 CYP26A1O43174 497 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 ZC3H11AO75152 810 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLIP3-206ENST00000593074 GGPS1O95749 300 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 STAT5BP51692 787 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 WDR78Q5VTH9 848 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 KCNV1Q6PIU1 500 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 METTL7BQ6UX53 244 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 SND1Q7KZF4 910 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLIP3-206ENST00000593074 SLC47A2Q86VL8 602 aa21.22■□□□□ 0.99
CLIP3-206ENST00000593074 DNAJC25-GNG10A0A024R161 153 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 SOCS7O14512 581 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 RAD51CO43502 376 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 CYP2C19P33261 490 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 GCNT1Q02742 428 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 PSMD6Q15008 389 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 LY6KQ17RY6 165 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 C11orf63Q6NUN7 778 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 PSPC1Q8WXF1 523 aaKnown RBP21.21■□□□□ 0.99
CLIP3-206ENST00000593074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.21■□□□□ 0.99
CLIP3-206ENST00000593074 VPS18Q9P253 973 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 ADAM21Q9UKJ8 722 aa21.21■□□□□ 0.99
CLIP3-206ENST00000593074 DIS3Q9Y2L1 958 aaKnown RBP21.21■□□□□ 0.99
CLIP3-206ENST00000593074 SYF2O95926 243 aaKnown RBP21.2■□□□□ 0.99
CLIP3-206ENST00000593074 FMO1Q01740 532 aa21.2■□□□□ 0.99
CLIP3-206ENST00000593074 ENOSF1Q7L5Y1 443 aa21.2■□□□□ 0.99
CLIP3-206ENST00000593074 FGD4Q96M96 766 aa21.2■□□□□ 0.99
CLIP3-206ENST00000593074 EPB41L5Q9HCM4 733 aa21.2■□□□□ 0.99
CLIP3-206ENST00000593074 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.2■□□□□ 0.99
CLIP3-206ENST00000593074 FAN1Q9Y2M0 1017 aa21.2■□□□□ 0.99
CLIP3-206ENST00000593074 CCDC188H7C350 402 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 ERVK-9P63128 1117 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 GPC5P78333 572 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 GUCY2DQ02846 1103 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 PAK2Q13177 524 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 DEPTORQ8TB45 409 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 EXOC4Q96A65 974 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 PNMA3Q9UL41 463 aa21.2■□□□□ 0.98
CLIP3-206ENST00000593074 ZSCAN5CA6NGD5 496 aaPredicted RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 LRRIQ4A6NIV6 560 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 UNCXA6NJT0 531 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 MTA2O94776 668 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 CYP11B1P15538 503 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 TCF7P36402 384 aaPredicted RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 PDE6CP51160 858 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 GYS2P54840 703 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 DCAF12L1Q5VU92 463 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 TAF3Q5VWG9 929 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 SHCBP1Q8NEM2 672 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 FAM81BQ96LP2 452 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 CARD9Q9H257 536 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 ZNF408Q9H9D4 720 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 ACP6Q9NPH0 428 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 AGO2Q9UKV8 859 aaKnown RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 AGPSO00116 658 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 CLSTN1O94985 981 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 MMEP08473 750 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 CARSP49589 748 aaKnown RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 NLRP11P59045 1033 aaKnown RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 CDR2Q01850 454 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 SLFN12LQ6IEE8 588 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 KLHL7Q8IXQ5 586 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 EIF1ADQ8N9N8 165 aaKnown RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 DDX1Q92499 740 aaKnown RBP21.19■□□□□ 0.98
CLIP3-206ENST00000593074 ZNF516Q92618 1163 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 TATDN2Q93075 761 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 HAPLN2Q9GZV7 340 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 AZI2Q9H6S1 392 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 PSD3Q9NYI0 1048 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 PPME1Q9Y570 386 aa21.19■□□□□ 0.98
CLIP3-206ENST00000593074 ZNFX1Q9P2E3 1918 aaKnown RBP21.18■□□□□ 0.98
CLIP3-206ENST00000593074 GOLGA6BA6NDN3 693 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 BHMG1C9JSJ3 638 aaPredicted RBP21.18■□□□□ 0.98
CLIP3-206ENST00000593074 K7ERI5 159 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 TULP1O00294 542 aaPredicted RBP21.18■□□□□ 0.98
CLIP3-206ENST00000593074 ZACNQ401N2 412 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 CRELD2Q6UXH1 353 aaPredicted RBP21.18■□□□□ 0.98
CLIP3-206ENST00000593074 GTF3C2Q8WUA4 911 aaPredicted RBP21.18■□□□□ 0.98
CLIP3-206ENST00000593074 CASKIN2Q8WXE0 1202 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 AP1M1Q9BXS5 423 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 TMEM134Q9H6X4 195 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 CTTNBP2NLQ9P2B4 639 aa21.18■□□□□ 0.98
CLIP3-206ENST00000593074 ESYT3A0FGR9 886 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 KRIT1O00522 736 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 RNF40O75150 1001 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 ARIH2O95376 493 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 CYP2C8P10632 490 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 GGCXP38435 758 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 ZBTB9Q96C00 473 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 C1orf112Q9NSG2 853 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 MAFO75444 373 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms