RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 NLRP11P59045 1033 aaKnown RBP28.12■■■□□ 2.09
RUNDC3A-206ENST00000590941 MKRN3Q13064 507 aaKnown RBP28.12■■■□□ 2.09
RUNDC3A-206ENST00000590941 DHX38Q92620 1227 aaKnown RBP28.12■■■□□ 2.09
RUNDC3A-206ENST00000590941 MMS19Q96T76 1030 aa28.12■■■□□ 2.09
RUNDC3A-206ENST00000590941 ANKFY1Q9P2R3 1169 aa28.12■■■□□ 2.09
RUNDC3A-206ENST00000590941 GRID2IPA4D2P6 1211 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 SRGAP2O75044 1071 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 LGALS2P05162 132 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 PRKCBP05771 671 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 GALCP54803 685 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 CREG2Q8IUH2 290 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 RNF149Q8NC42 400 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 OLIG1Q8TAK6 271 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 RUBCNQ92622 972 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 CAPZA3Q96KX2 299 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 POP1Q99575 1024 aaKnown RBP28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 ABHD16BQ9H3Z7 469 aa28.11■■■□□ 2.09
RUNDC3A-206ENST00000590941 TARSL2A2RTX5 802 aaKnown RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 GZMAP12544 262 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 ZSCAN20P17040 1043 aaPredicted RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 CRELD2Q6UXH1 353 aaPredicted RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 TAF4BQ92750 862 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 MAML3Q96JK9 1138 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 KREMEN1Q96MU8 473 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 KATNBL1Q9H079 304 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 TOPORSQ9NS56 1045 aaPredicted RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 PPFIA4O75335 1185 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 PDE6CP51160 858 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 MKRN4PQ13434 485 aaPredicted RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 PRPF4BQ13523 1007 aaKnown RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 TCEAL1Q15170 157 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 CFAP221Q4G0U5 840 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 BRSK2Q8IWQ3 736 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 RHOT2Q8IXI1 618 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 HNRNPLLQ8WVV9 542 aaKnown RBP28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 ANKZF1Q9H8Y5 726 aa28.1■■■□□ 2.09
RUNDC3A-206ENST00000590941 MYH10P35580 1976 aa28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 C4BPAP04003 597 aaKnown RBP28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 ACOT2P49753 483 aa28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 DRP2Q13474 957 aa28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 IQSEC1Q6DN90 963 aa28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 TPCN2Q8NHX9 752 aa28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 ACO2Q99798 780 aaKnown RBP28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 ARFGAP3Q9NP61 516 aa28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 SEPT11Q9NVA2 429 aaKnown RBP28.09■■■□□ 2.09
RUNDC3A-206ENST00000590941 MANSC4A6NHS7 340 aaPredicted RBP28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 ACKR2O00590 384 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 OGTO15294 1046 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 C22orf31O95567 290 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 USP8P40818 1118 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 PIK3CAP42336 1068 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 HADHBP55084 474 aaKnown RBP28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 BPIFB4P59827 614 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 MCL1Q07820 350 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 EFCAB12Q6NXP0 572 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 NFRKBQ6P4R8 1299 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 SLFN11Q7Z7L1 901 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 LRRC71Q8N4P6 559 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 EPS8L1Q8TE68 723 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 TINF2Q9BSI4 451 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 ISCUQ9H1K1 167 aa28.08■■■□□ 2.09
RUNDC3A-206ENST00000590941 RTN2O75298 545 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 SNAI1O95863 264 aaPredicted RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 SRGAP2CP0DJJ0 459 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 PHKA2P46019 1235 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 BIRC3Q13489 604 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 RPS6KA1Q15418 735 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 DUSP28Q4G0W2 176 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 WDR93Q6P2C0 686 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 ZNF677Q86XU0 584 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 RHPN2Q8IUC4 686 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 WDR49Q8IV35 697 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 RPUSD2Q8IZ73 545 aaKnown RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 MMGT1Q8N4V1 131 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 LRRC57Q8N9N7 239 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 ZBTB45Q96K62 511 aaPredicted RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 PBKQ96KB5 322 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 HAPLN2Q9GZV7 340 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 NOCTQ9UK39 431 aaKnown RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 ZSWIM8A7E2V4 1837 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 HLA-DRAP01903 254 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 HOXD8P13378 290 aaPredicted RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 TBXAS1P24557 533 aaPredicted RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 TMOD1P28289 359 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 PTENP60484 403 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 TSHZ1Q6ZSZ6 1077 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 IFNLR1Q8IU57 520 aaPredicted RBP28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 PTPN18Q99952 460 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 TCHPQ9BT92 498 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 FZD8Q9H461 694 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 PDE11AQ9HCR9 933 aa28.07■■■□□ 2.08
RUNDC3A-206ENST00000590941 TRPM7Q96QT4 1865 aa28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 ZNF185O15231 689 aa28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 MPZL3Q6UWV2 235 aa28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 NOA1Q8NC60 698 aaKnown RBP28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 ZNF516Q92618 1163 aa28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 IMPG2Q9BZV3 1241 aa28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 PRMT7Q9NVM4 692 aaPredicted RBP28.06■■■□□ 2.08
RUNDC3A-206ENST00000590941 CNTNAP2Q9UHC6 1331 aa28.05■■■□□ 2.08
RUNDC3A-206ENST00000590941 FTCDO95954 541 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms