RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 ZBTB33Q86T24 672 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 COLGALT1Q8NBJ5 622 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 ZNF507Q8TCN5 953 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 NRDE2Q9H7Z3 1164 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 TMEM206Q9H813 350 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 MIOSQ9NXC5 875 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 ANKFY1Q9P2R3 1169 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 NLRC5Q86WI3 1866 aa20.5■□□□□ 0.87
MBD1-223ENST00000590215 ANKRD63C9JTQ0 380 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 PRPF6O94906 941 aaKnown RBP20.49■□□□□ 0.87
MBD1-223ENST00000590215 RPN1P04843 607 aaKnown RBP20.49■□□□□ 0.87
MBD1-223ENST00000590215 ADSSP30520 456 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 HOXD13P35453 343 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 DSC1Q08554 894 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 POSTNQ15063 836 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 BMT2Q1RMZ1 405 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 C11orf84Q9BUA3 381 aaPredicted RBP20.49■□□□□ 0.87
MBD1-223ENST00000590215 CCDC94Q9BW85 323 aaPredicted RBP20.49■□□□□ 0.87
MBD1-223ENST00000590215 EXOC1Q9NV70 894 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 KLK14Q9P0G3 267 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 PCDHB12Q9Y5F1 795 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 UBE4BO95155 1302 aa20.49■□□□□ 0.87
MBD1-223ENST00000590215 RFXAPO00287 272 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 OGTO15294 1046 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 B4GALT3O60512 393 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 PRPF40AO75400 957 aaKnown RBP20.48■□□□□ 0.87
MBD1-223ENST00000590215 RHOBTB3O94955 611 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 POMCP01189 267 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 SCNN1GP51170 649 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 STK4Q13043 487 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 ADGRE1Q14246 886 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 KCNB1Q14721 858 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 KYAT1Q16773 422 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 SPOUT1Q5T280 376 aaKnown RBP20.48■□□□□ 0.87
MBD1-223ENST00000590215 KCNT2Q6UVM3 1135 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 ZNF280BQ86YH2 543 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 THNSL1Q8IYQ7 743 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 SCFD1Q8WVM8 642 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 ACAP3Q96P50 834 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 IKZF4Q9H2S9 585 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 SLC39A2Q9NP94 309 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 GDAQ9Y2T3 454 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 KIAA1671Q9BY89 1806 aa20.48■□□□□ 0.87
MBD1-223ENST00000590215 TISP43B9A030 160 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 PTGESO14684 152 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 DDHD2O94830 711 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 GALTP07902 379 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 CLTAP09496 248 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 RNASELQ05823 741 aaKnown RBP20.47■□□□□ 0.87
MBD1-223ENST00000590215 GRIK3Q13003 919 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 GPM6BQ13491 265 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 COLGALT2Q8IYK4 626 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 KLHL23Q8NBE8 558 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 KIAA0895Q8NCT3 520 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 SPATA20Q8TB22 786 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 GDPD5Q8WTR4 605 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 MYLIPQ8WY64 445 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 ZNF558Q96NG5 402 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 GAS2L1Q99501 681 aaPredicted RBP20.47■□□□□ 0.87
MBD1-223ENST00000590215 TMEM175Q9BSA9 504 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 TOPORSQ9NS56 1045 aaPredicted RBP20.47■□□□□ 0.87
MBD1-223ENST00000590215 LMCD1Q9NZU5 365 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 PLAGL2Q9UPG8 496 aa20.47■□□□□ 0.87
MBD1-223ENST00000590215 MEFVO15553 781 aaPredicted RBP20.46■□□□□ 0.87
MBD1-223ENST00000590215 KINO60870 393 aaKnown RBP20.46■□□□□ 0.87
MBD1-223ENST00000590215 ITGB1P05556 798 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 ADRB2P07550 413 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 HARSP12081 509 aaKnown RBP20.46■□□□□ 0.87
MBD1-223ENST00000590215 GARTP22102 1010 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 PPM1AP35813 382 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 ALDH7A1P49419 539 aaKnown RBP20.46■□□□□ 0.87
MBD1-223ENST00000590215 YARSP54577 528 aaKnown RBP20.46■□□□□ 0.87
MBD1-223ENST00000590215 BCAR1P56945 870 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 OSTNP61366 133 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 POU5F1Q01860 360 aaKnown RBP20.46■□□□□ 0.87
MBD1-223ENST00000590215 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 PNOCQ13519 176 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 NAB2Q15742 525 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 SYCP3Q8IZU3 236 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 SLC39A11Q8N1S5 342 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 SPPL3Q8TCT6 385 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 SNX27Q96L92 541 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 GBP4Q96PP9 640 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 RPS6KC1Q96S38 1066 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 MSTO1Q9BUK6 570 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 PLEKHA5Q9HAU0 1116 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 CNTN3Q9P232 1028 aa20.46■□□□□ 0.87
MBD1-223ENST00000590215 TGFB1I1O43294 461 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 ZC3H11AO75152 810 aaKnown RBP eCLIP20.45■□□□□ 0.86
MBD1-223ENST00000590215 THP07101 528 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 KCNE1P15382 129 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 MATR3P43243 847 aaKnown RBP eCLIP20.45■□□□□ 0.86
MBD1-223ENST00000590215 SNRPFP62306 86 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 CCDC47Q96A33 483 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 GSDMAQ96QA5 445 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 PPP1R10Q96QC0 940 aaKnown RBP20.45■□□□□ 0.86
MBD1-223ENST00000590215 GBP3Q9H0R5 595 aa20.45■□□□□ 0.86
MBD1-223ENST00000590215 LMAN2LQ9H0V9 348 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms