RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SCNN1GP51170 649 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 OSTNP61366 133 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 UBE2HP62256 183 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 EHHADHQ08426 723 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 GPM6BQ13491 265 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 SLFN12LQ6IEE8 588 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 ZFP42Q96MM3 310 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 ZNF558Q96NG5 402 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 TOPORSQ9NS56 1045 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-212ENST00000590096 HOOK1Q9UJC3 728 aaKnown RBP23.29■■□□□ 1.32
ATG4D-212ENST00000590096 TDRD15B5MCY1 1934 aaKnown RBP23.28■■□□□ 1.32
ATG4D-212ENST00000590096 CARNS1A5YM72 827 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 H3BNC9 293 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 EIF3DO15371 548 aaKnown RBP eCLIP23.28■■□□□ 1.32
ATG4D-212ENST00000590096 KLRC4O43908 158 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
ATG4D-212ENST00000590096 PRPF40AO75400 957 aaKnown RBP23.28■■□□□ 1.32
ATG4D-212ENST00000590096 RPN1P04843 607 aaKnown RBP23.28■■□□□ 1.32
ATG4D-212ENST00000590096 PRR29P0C7W0 189 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 FOSL2P15408 326 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 AFF1P51825 1210 aaKnown RBP23.28■■□□□ 1.32
ATG4D-212ENST00000590096 KCNA1Q09470 495 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 KMT5BQ4FZB7 885 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 CEP120Q8N960 986 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 P2RX5Q93086 422 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 TIGD1Q96MW7 591 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 ACAP3Q96P50 834 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 GBP4Q96PP9 640 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 MSTO1Q9BUK6 570 aa23.28■■□□□ 1.32
ATG4D-212ENST00000590096 CDH23Q9H251 3354 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 ANKRD63C9JTQ0 380 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 NR1I2O75469 434 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 IGFBP4P22692 258 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 PPM1AP35813 382 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 ALDH7A1P49419 539 aaKnown RBP23.27■■□□□ 1.32
ATG4D-212ENST00000590096 DPYDQ12882 1025 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 GRIK3Q13003 919 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 PSMD2Q13200 908 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 POSTNQ15063 836 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 KYAT1Q16773 422 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 SLC39A4Q6P5W5 647 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 KCNT2Q6UVM3 1135 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 CLEC17AQ6ZS10 378 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 NRDE2Q9H7Z3 1164 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 SLC39A2Q9NP94 309 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 UBE4BO95155 1302 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 CHD7Q9P2D1 2997 aa23.27■■□□□ 1.32
ATG4D-212ENST00000590096 UNC80Q8N2C7 3258 aa23.27■■□□□ 1.31
ATG4D-212ENST00000590096 BCAR1P56945 870 aa23.26■■□□□ 1.31
ATG4D-212ENST00000590096 ZNF280BQ86YH2 543 aa23.26■■□□□ 1.31
ATG4D-212ENST00000590096 KLHL23Q8NBE8 558 aa23.26■■□□□ 1.31
ATG4D-212ENST00000590096 GLIS3Q8NEA6 775 aa23.26■■□□□ 1.31
ATG4D-212ENST00000590096 HAPLN2Q9GZV7 340 aa23.26■■□□□ 1.31
ATG4D-212ENST00000590096 MIOSQ9NXC5 875 aa23.26■■□□□ 1.31
ATG4D-212ENST00000590096 CITO14578 2027 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 A0A0B4J269 797 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 TISP43B9A030 160 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 OGTO15294 1046 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 LPXNO60711 386 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 PBX3P40426 434 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 PNOCQ13519 176 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 PTPROQ16827 1216 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 SEZ6Q53EL9 994 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 EPM2AIP1Q7L775 607 aaPredicted RBP23.25■■□□□ 1.31
ATG4D-212ENST00000590096 GSTCDQ8NEC7 633 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 ZNF507Q8TCN5 953 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 POMGNT1Q8WZA1 660 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 TMEM175Q9BSA9 504 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 DNAJB4Q9UDY4 337 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 STXBP5LQ9Y2K9 1186 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 STYXL1Q9Y6J8 313 aa23.25■■□□□ 1.31
ATG4D-212ENST00000590096 FGF18O76093 207 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 DDHD2O94830 711 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 ITGB1P05556 798 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 THP07101 528 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 CLTAP09496 248 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 ADGRE1Q14246 886 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 IKZF4Q9H2S9 585 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 ALG13Q9NP73 1137 aaKnown RBP23.24■■□□□ 1.31
ATG4D-212ENST00000590096 SPG21Q9NZD8 308 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 AGO2Q9UKV8 859 aaKnown RBP23.24■■□□□ 1.31
ATG4D-212ENST00000590096 PLAGL2Q9UPG8 496 aa23.24■■□□□ 1.31
ATG4D-212ENST00000590096 DLL1O00548 723 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 PTGESO14684 152 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 RHOBTB3O94955 611 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 SMC2O95347 1197 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 ALDH2P05091 517 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 GALTP07902 379 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 KRT17Q04695 432 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 SCFD1Q8WVM8 642 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 SNX27Q96L92 541 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 LMAN2LQ9H0V9 348 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 LMCD1Q9NZU5 365 aa23.23■■□□□ 1.31
ATG4D-212ENST00000590096 TRIP11Q15643 1979 aa23.22■■□□□ 1.31
ATG4D-212ENST00000590096 NT5C1B-RDH14C9J2C7 533 aa23.22■■□□□ 1.31
ATG4D-212ENST00000590096 GOLGA6L22H0YM25 854 aa23.22■■□□□ 1.31
ATG4D-212ENST00000590096 GRM6O15303 877 aa23.22■■□□□ 1.31
ATG4D-212ENST00000590096 B4GALT3O60512 393 aa23.22■■□□□ 1.31
ATG4D-212ENST00000590096 CXCL8P10145 99 aa23.22■■□□□ 1.31
ATG4D-212ENST00000590096 GARTP22102 1010 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms