RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 HAS1Q92839 578 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 DDX23Q9BUQ8 820 aaKnown RBP16.8■□□□□ 0.28
SF3A2-204ENST00000589118 BCO2Q9BYV7 579 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 SH3GLB2Q9NR46 395 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 FBXW11Q9UKB1 542 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
SF3A2-204ENST00000589118 TPRP12270 2363 aaKnown RBP16.79■□□□□ 0.28
SF3A2-204ENST00000589118 CASTOR2A6NHX0 329 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 NR1I2O75469 434 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 C8AP07357 584 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 TARSP26639 723 aaKnown RBP16.79■□□□□ 0.28
SF3A2-204ENST00000589118 RFC5P40937 340 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
SF3A2-204ENST00000589118 CAPSQ13938 189 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 LPAL2Q16609 132 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 PPM1LQ5SGD2 360 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 FAM171A1Q5VUB5 890 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 TPH2Q8IWU9 490 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
SF3A2-204ENST00000589118 KCNB2Q92953 911 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 SHDQ96IW2 340 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 MTRQ99707 1265 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 KCNMB3Q9NPA1 279 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 PARD6AQ9NPB6 346 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 LTB4R2Q9NPC1 389 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 GIT1Q9Y2X7 761 aa16.79■□□□□ 0.28
SF3A2-204ENST00000589118 SHISA7A6NL88 538 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 NRG2O14511 850 aaPredicted RBP16.78■□□□□ 0.28
SF3A2-204ENST00000589118 ASAP2O43150 1006 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 KIF4AO95239 1232 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 TGM1P22735 817 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 STK3Q13188 491 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 EPHA7Q15375 998 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 BMP2KLQ5H9B9 411 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 C4orf19Q8IY42 314 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 OXER1Q8TDS5 423 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 TCP11Q8WWU5 503 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 ATRIPQ8WXE1 791 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 MCRS1Q96EZ8 462 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 AGXT2Q9BYV1 514 aa16.78■□□□□ 0.28
SF3A2-204ENST00000589118 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
SF3A2-204ENST00000589118 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
SF3A2-204ENST00000589118 DNMT3BQ9UBC3 853 aaKnown RBP16.78■□□□□ 0.28
SF3A2-204ENST00000589118 FAM205CA6NFA0 338 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 GLRA2P23416 452 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 FZD5Q13467 585 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 TOB2Q14106 344 aaPredicted RBP16.77■□□□□ 0.28
SF3A2-204ENST00000589118 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
SF3A2-204ENST00000589118 PSMD5Q16401 504 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 ZNF528Q3MIS6 628 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 EARS2Q5JPH6 523 aaKnown RBP16.77■□□□□ 0.28
SF3A2-204ENST00000589118 MOXD1Q6UVY6 613 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 TPRG1Q6ZUI0 275 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 MAEAQ7L5Y9 396 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 SLC7A14Q8TBB6 771 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 PHF20Q9BVI0 1012 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 HEBP1Q9NRV9 189 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 FBXO4Q9UKT5 387 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 USP18Q9UMW8 372 aa16.77■□□□□ 0.28
SF3A2-204ENST00000589118 SMG5Q9UPR3 1016 aaKnown RBP16.77■□□□□ 0.28
SF3A2-204ENST00000589118 CCNT1O60563 726 aaKnown RBP16.76■□□□□ 0.27
SF3A2-204ENST00000589118 SLITRK3O94933 977 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 AXLP30530 894 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 HSPA4P34932 840 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 RSPO2Q6UXX9 243 aaPredicted RBP16.76■□□□□ 0.27
SF3A2-204ENST00000589118 NPAS3Q8IXF0 933 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 DAGLBQ8NCG7 672 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 ZBTB44Q8NCP5 570 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 TTPALQ9BTX7 342 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 TRIP11Q15643 1979 aa16.76■□□□□ 0.27
SF3A2-204ENST00000589118 ACACBO00763 2458 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 PTGESO14684 152 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 MARCH6O60337 910 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 LILRB5O75023 590 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 CDC45O75419 566 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 OR1D2P34982 312 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 ARL2P36404 184 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 PRKCQQ04759 706 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 SPIRE1Q08AE8 756 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 GRIK3Q13003 919 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 ZBTB41Q5SVQ8 909 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 AXDND1Q5T1B0 1012 aaPredicted RBP16.75■□□□□ 0.27
SF3A2-204ENST00000589118 LIN9Q5TKA1 542 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 OTUD6AQ7L8S5 288 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 TRIM22Q8IYM9 498 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 FAM20AQ96MK3 541 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 GPRC5CQ9NQ84 441 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 ZSCAN32Q9NX65 697 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 SNTG2Q9NY99 539 aa16.75■□□□□ 0.27
SF3A2-204ENST00000589118 NDRG2Q9UN36 371 aaKnown RBP16.75■□□□□ 0.27
SF3A2-204ENST00000589118 ZFP37Q9Y6Q3 630 aaPredicted RBP16.75■□□□□ 0.27
SF3A2-204ENST00000589118 MAP1BP46821 2468 aaKnown RBP16.75■□□□□ 0.27
SF3A2-204ENST00000589118 I3L4J1 428 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 SPTLC1O15269 473 aa16.74■□□□□ 0.27
SF3A2-204ENST00000589118 DKC1O60832 514 aaKnown RBP eCLIP16.74■□□□□ 0.27
SF3A2-204ENST00000589118 DEXIO95424 95 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms