RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 LRRC8AQ8IWT6 810 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 NEK11Q8NG66 645 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 PLEKHO2Q8TD55 490 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 DIS3LQ8TF46 1054 aaKnown RBP24.17■■□□□ 1.46
ATG4D-209ENST00000588857 ZNF830Q96NB3 372 aaPredicted RBP24.17■■□□□ 1.46
ATG4D-209ENST00000588857 FNBP1Q96RU3 617 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 ADPGKQ9BRR6 497 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 CDT1Q9H211 546 aa24.17■■□□□ 1.46
ATG4D-209ENST00000588857 FAM207AQ9NSI2 230 aaPredicted RBP24.17■■□□□ 1.46
ATG4D-209ENST00000588857 DLATP10515 647 aaKnown RBP24.16■■□□□ 1.46
ATG4D-209ENST00000588857 ADKP55263 362 aaKnown RBP24.16■■□□□ 1.46
ATG4D-209ENST00000588857 KCNMA1Q12791 1236 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 SEZ6Q53EL9 994 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 FIGNQ5HY92 759 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 PRPF38BQ5VTL8 546 aaKnown RBP24.16■■□□□ 1.46
ATG4D-209ENST00000588857 CNGA4Q8IV77 575 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 THNSL1Q8IYQ7 743 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 SLC43A3Q8NBI5 491 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 CACTINQ8WUQ7 758 aaKnown RBP24.16■■□□□ 1.46
ATG4D-209ENST00000588857 TMEM40Q8WWA1 233 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 WNT8BQ93098 351 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 LRRIQ3A6PVS8 624 aaPredicted RBP24.16■■□□□ 1.46
ATG4D-209ENST00000588857 ARVCFO00192 962 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 FAM189A1O60320 539 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 AXLP30530 894 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 GCLMP48507 274 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 PPP3CAQ08209 521 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 C1orf220Q5T0J3 134 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 LSM14BQ9BX40 385 aaKnown RBP24.16■■□□□ 1.46
ATG4D-209ENST00000588857 GCNT4Q9P109 453 aa24.16■■□□□ 1.46
ATG4D-209ENST00000588857 P4HA2O15460 535 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 NRDCO43847 1150 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 CTSHP09668 335 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 GTF2H1P32780 548 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 TNFSF9P41273 254 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 FXR1P51114 621 aaKnown RBP eCLIP24.15■■□□□ 1.46
ATG4D-209ENST00000588857 GOLGA8FQ08AF8 430 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 GOLGA8DPQ0D2H9 430 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 KYAT1Q16773 422 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 CBWD6Q4V339 395 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 CBWD3Q5JTY5 395 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 CBWD5Q5RIA9 395 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 NOTUMQ6P988 496 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 TC2NQ8N9U0 490 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 AGPAT5Q9NUQ2 364 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 CPSF3Q9UKF6 684 aaKnown RBP24.15■■□□□ 1.46
ATG4D-209ENST00000588857 CAPN11Q9UMQ6 739 aa24.15■■□□□ 1.46
ATG4D-209ENST00000588857 LUC7L2Q9Y383 392 aaKnown RBP24.15■■□□□ 1.46
ATG4D-209ENST00000588857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.15■■□□□ 1.46
ATG4D-209ENST00000588857 TTC26A0AVF1 554 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 MFAP3LO75121 409 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 MXI1P50539 228 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 DCAF4L1Q3SXM0 396 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 BRSK2Q8IWQ3 736 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 ZNF397Q8NF99 534 aaPredicted RBP24.14■■□□□ 1.45
ATG4D-209ENST00000588857 DPF3Q92784 378 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 POP1Q99575 1024 aaKnown RBP24.14■■□□□ 1.45
ATG4D-209ENST00000588857 SENP6Q9GZR1 1112 aaPredicted RBP24.14■■□□□ 1.45
ATG4D-209ENST00000588857 TRPV6Q9H1D0 765 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 PDE11AQ9HCR9 933 aa24.14■■□□□ 1.45
ATG4D-209ENST00000588857 ANK1P16157 1881 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 A0A1W2PQJ5 194 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 CHRNA1P02708 482 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 TNNI1P19237 187 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 PON1P27169 355 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 HOXA11P31270 313 aaPredicted RBP24.13■■□□□ 1.45
ATG4D-209ENST00000588857 OSTNP61366 133 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 LRMPQ12912 555 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 SLC27A1Q6PCB7 646 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 CCDC51Q96ER9 411 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 TTYH3Q9C0H2 523 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 TMEM117Q9H0C3 514 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 C11orf49Q9H6J7 331 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 TMEM8AQ9HCN3 771 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 CITO14578 2027 aa24.13■■□□□ 1.45
ATG4D-209ENST00000588857 PMM2O15305 246 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 CAND2O75155 1236 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 CLTAP09496 248 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 SLC9A1P19634 815 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 KRT9P35527 623 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 CLDN10P78369 228 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 MGAT3Q09327 533 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 SURF1Q15526 300 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 KRT39Q6A163 491 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 CACNA2D4Q7Z3S7 1137 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 DHX38Q92620 1227 aaKnown RBP24.12■■□□□ 1.45
ATG4D-209ENST00000588857 PANX2Q96RD6 677 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 EDEM3Q9BZQ6 932 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 KCNF1Q9H3M0 494 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 RPF1Q9H9Y2 349 aaKnown RBP24.12■■□□□ 1.45
ATG4D-209ENST00000588857 PLCB1Q9NQ66 1216 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 PIN4Q9Y237 131 aaKnown RBP24.12■■□□□ 1.45
ATG4D-209ENST00000588857 NOC2LQ9Y3T9 749 aaKnown RBP24.12■■□□□ 1.45
ATG4D-209ENST00000588857 B4GALT4O60513 344 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 RPS6KA5O75582 802 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 STAG3L1P0CL83 205 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 TSR1Q2NL82 804 aaKnown RBP24.12■■□□□ 1.45
ATG4D-209ENST00000588857 CEP120Q8N960 986 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 FAM212AQ96EL1 285 aa24.12■■□□□ 1.45
ATG4D-209ENST00000588857 RNF225M0QZC1 329 aaPredicted RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms