RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 MYL7Q01449 175 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 MGAT3Q09327 533 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 TC2NQ8N9U0 490 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 CCDC112Q8NEF3 446 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 CACTINQ8WUQ7 758 aaKnown RBP33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 CCDC127Q96BQ5 260 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 CPB2Q96IY4 423 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 SENP6Q9GZR1 1112 aaPredicted RBP33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 TMEM8AQ9HCN3 771 aa33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 LUC7L2Q9Y383 392 aaKnown RBP33.68■■■□□ 2.98
CAPNS1-206ENST00000588815 MXI1P50539 228 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 AP3M2P53677 418 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 KRT39Q6A163 491 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 SLC27A1Q6PCB7 646 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 ZNF397Q8NF99 534 aaPredicted RBP33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 TMEM40Q8WWA1 233 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 PANX2Q96RD6 677 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 TRMT13Q9NUP7 481 aaKnown RBP33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 GCNT4Q9P109 453 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 SQORQ9Y6N5 450 aa33.67■■■□□ 2.98
CAPNS1-206ENST00000588815 CLTAP09496 248 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 HOXA11P31270 313 aaPredicted RBP33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 PPP3CAQ08209 521 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 CBWD6Q4V339 395 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 CBWD3Q5JTY5 395 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 FAM26DQ5JW98 314 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 CBWD5Q5RIA9 395 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 WNT8BQ93098 351 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 FBXL5Q9UKA1 691 aa33.66■■■□□ 2.98
CAPNS1-206ENST00000588815 TTC26A0AVF1 554 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 SGPL1O95470 568 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 PON1P27169 355 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 THPOP40225 353 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 KLK7P49862 253 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 CDK7P50613 346 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 PDCD11Q14690 1871 aaKnown RBP33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 CRACR2AQ9BSW2 395 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 COQ4Q9Y3A0 265 aa33.65■■■□□ 2.98
CAPNS1-206ENST00000588815 IL18RAPO95256 599 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 FXR1P51114 621 aaKnown RBP eCLIP33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 ZBED6P86452 979 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 ARID5BQ14865 1188 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 TRIM71Q2Q1W2 868 aaKnown RBP33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 ZBTB41Q5SVQ8 909 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 THNSL1Q8IYQ7 743 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 CPLX3Q8WVH0 158 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 CGRRF1Q99675 332 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 LSM14BQ9BX40 385 aaKnown RBP33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 TMEM117Q9H0C3 514 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 RPF1Q9H9Y2 349 aaKnown RBP33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 FAM207AQ9NSI2 230 aaPredicted RBP33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 CEP72Q9P209 647 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 MROH7Q68CQ1 1323 aa33.64■■■□□ 2.98
CAPNS1-206ENST00000588815 CHRNA1P02708 482 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 DLATP10515 647 aaKnown RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 FGFR4P22455 802 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 GCLMP48507 274 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 ADKP55263 362 aaKnown RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 USP38Q8NB14 1042 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 B4GALT4O60513 344 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 RPS6KA5O75582 802 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 MYCP01106 439 aaPredicted RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 TNNI1P19237 187 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 KRT9P35527 623 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 TNFSF9P41273 254 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 CDR2LQ86X02 465 aaPredicted RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 WDR49Q8IV35 697 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 U2AF1L4Q8WU68 220 aaKnown RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 DHX38Q92620 1227 aaKnown RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 NUCKS1Q9H1E3 243 aaKnown RBP33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 PDE11AQ9HCR9 933 aa33.63■■■□□ 2.97
CAPNS1-206ENST00000588815 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP33.63■■■□□ 2.978e-17■□□□□ 10.3
CAPNS1-206ENST00000588815 RFX1P22670 979 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 GRM5P41594 1212 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 TSR1Q2NL82 804 aaKnown RBP33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 EPC2Q52LR7 807 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 TRIM65Q6PJ69 517 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 FAM228AQ86W67 206 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 OR8K1Q8NGG5 319 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 CAGE1Q8TC20 777 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 NAA15Q9BXJ9 866 aaKnown RBP33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 KCNF1Q9H3M0 494 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 CHST12Q9NRB3 414 aa33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 PIN4Q9Y237 131 aaKnown RBP33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 NOC2LQ9Y3T9 749 aaKnown RBP33.62■■■□□ 2.97
CAPNS1-206ENST00000588815 GPR182O15218 404 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 STAG3L1P0CL83 205 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 SLC9A1P19634 815 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 C15orf39Q6ZRI6 1047 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 ANKLE1Q8NAG6 615 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 EHBP1Q8NDI1 1231 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 DNAJC7Q99615 494 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 TMX1Q9H3N1 280 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 ASB7Q9H672 318 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 ABHD10Q9NUJ1 306 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 ZKSCAN5Q9Y2L8 839 aa33.61■■■□□ 2.97
CAPNS1-206ENST00000588815 NOL4O94818 638 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 CTSHP09668 335 aa33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 ENOX2Q16206 610 aaKnown RBP33.6■■■□□ 2.97
CAPNS1-206ENST00000588815 SEZ6Q53EL9 994 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms