RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 MAPK13O15264 365 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 NBNO60934 754 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 TIMP1P01033 207 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 PRKCSHP14314 528 aaPredicted RBP24.61■■□□□ 1.53
ACTN4-210ENST00000588618 TNFSF9P41273 254 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 OSTNP61366 133 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 SEPT8Q92599 483 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 FTHL17Q9BXU8 183 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 IFNKQ9P0W0 207 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 CITO14578 2027 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 KIAA0355O15063 1070 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 WNT7BP56706 349 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 MIIPQ5JXC2 388 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 TCERG1LQ5VWI1 586 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 TMEM192Q8IY95 271 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 HACE1Q8IYU2 909 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 APBB2Q92870 758 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 TUBGCP2Q9BSJ2 902 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 CCDC94Q9BW85 323 aaPredicted RBP24.61■■□□□ 1.53
ACTN4-210ENST00000588618 EIF2AQ9BY44 585 aaKnown RBP24.61■■□□□ 1.53
ACTN4-210ENST00000588618 VPS16Q9H269 839 aa24.61■■□□□ 1.53
ACTN4-210ENST00000588618 RBAKQ9NYW8 714 aaPredicted RBP24.61■■□□□ 1.53
ACTN4-210ENST00000588618 RFC2P35250 354 aa24.6■■□□□ 1.53
ACTN4-210ENST00000588618 COPB1P53618 953 aaKnown RBP24.6■■□□□ 1.53
ACTN4-210ENST00000588618 FILIP1LQ4L180 1135 aa24.6■■□□□ 1.53
ACTN4-210ENST00000588618 DCAF17Q5H9S7 520 aaPredicted RBP24.6■■□□□ 1.53
ACTN4-210ENST00000588618 UBXN11Q5T124 520 aa24.6■■□□□ 1.53
ACTN4-210ENST00000588618 XPO4Q9C0E2 1151 aaKnown RBP24.6■■□□□ 1.53
ACTN4-210ENST00000588618 TMX1Q9H3N1 280 aa24.6■■□□□ 1.53
ACTN4-210ENST00000588618 TRIM43BA6NCK2 446 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 TPM3P06753 285 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 CLTAP09496 248 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 STAG3L1P0CL83 205 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 PTPN21Q16825 1174 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 FAM43BQ6ZT52 329 aaPredicted RBP24.59■■□□□ 1.53
ACTN4-210ENST00000588618 DEFB128Q7Z7B8 93 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 TMEM199Q8N511 208 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 TRIM43Q96BQ3 446 aaPredicted RBP24.59■■□□□ 1.53
ACTN4-210ENST00000588618 ADAM2Q99965 735 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 RPF1Q9H9Y2 349 aaKnown RBP24.59■■□□□ 1.53
ACTN4-210ENST00000588618 PCDH10Q9P2E7 1040 aa24.59■■□□□ 1.53
ACTN4-210ENST00000588618 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.59■■□□□ 1.53
ACTN4-210ENST00000588618 A0A1B0GTH6 734 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 MEFVO15553 781 aaPredicted RBP24.58■■□□□ 1.53
ACTN4-210ENST00000588618 RAB27AP51159 221 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 YARSP54577 528 aaKnown RBP24.58■■□□□ 1.53
ACTN4-210ENST00000588618 BFSP1Q12934 665 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 PLEKHG4Q58EX7 1191 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 DBF4BQ8NFT6 615 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 ACAP3Q96P50 834 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 FNBP1Q96RU3 617 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 FAM105AQ9NUU6 356 aa24.58■■□□□ 1.53
ACTN4-210ENST00000588618 CPSF3Q9UKF6 684 aaKnown RBP24.58■■□□□ 1.53
ACTN4-210ENST00000588618 EVI5O60447 810 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 MGEA5O60502 916 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 SKIP12755 728 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 GRM5P41594 1212 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 VAMP7P51809 220 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 DLG4P78352 724 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 CYP24A1Q07973 514 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 MAN2A1Q16706 1144 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 C1orf220Q5T0J3 134 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 C7orf61Q8IZ16 206 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 CCDC127Q96BQ5 260 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 FAM212AQ96EL1 285 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 MFSD14AQ96MC6 490 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 TRIM5Q9C035 493 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 PCDHB2Q9Y5E7 798 aa24.58■■□□□ 1.52
ACTN4-210ENST00000588618 TEX33O43247 280 aa24.57■■□□□ 1.52
ACTN4-210ENST00000588618 UBASH3AP57075 661 aa24.57■■□□□ 1.52
ACTN4-210ENST00000588618 PPP2R3AQ06190 1150 aa24.57■■□□□ 1.52
ACTN4-210ENST00000588618 SLC35C1Q96A29 364 aa24.57■■□□□ 1.52
ACTN4-210ENST00000588618 APOL6Q9BWW8 343 aa24.57■■□□□ 1.52
ACTN4-210ENST00000588618 TOPORSQ9NS56 1045 aaPredicted RBP24.57■■□□□ 1.52
ACTN4-210ENST00000588618 IPPQ9Y573 584 aa24.57■■□□□ 1.52
ACTN4-210ENST00000588618 CBFA2T2O43439 604 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 ADCY5O95622 1261 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 CXCL10P02778 98 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 TRIM49P0CI25 452 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 TRIM49CP0CI26 452 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 DLATP10515 647 aaKnown RBP24.56■■□□□ 1.52
ACTN4-210ENST00000588618 ZNF75DP51815 510 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 MCCD1P59942 119 aaPredicted RBP24.56■■□□□ 1.52
ACTN4-210ENST00000588618 MFSD5Q6N075 450 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 BRSK2Q8IWQ3 736 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 ANP32BQ92688 251 aaKnown RBP24.56■■□□□ 1.52
ACTN4-210ENST00000588618 FAM84AQ96KN4 292 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 NXF3Q9H4D5 531 aaKnown RBP24.56■■□□□ 1.52
ACTN4-210ENST00000588618 RTN4Q9NQC3 1192 aaKnown RBP24.56■■□□□ 1.52
ACTN4-210ENST00000588618 SNTG2Q9NY99 539 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 HES2Q9Y543 173 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 RALGAPA2Q2PPJ7 1873 aa24.56■■□□□ 1.52
ACTN4-210ENST00000588618 CXCL8P10145 99 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 IBSPP21815 317 aaPredicted RBP24.55■■□□□ 1.52
ACTN4-210ENST00000588618 ITGB8P26012 769 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 POU5F1Q01860 360 aaKnown RBP24.55■■□□□ 1.52
ACTN4-210ENST00000588618 DSC3Q14574 896 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 NR1I3Q14994 352 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 SURF1Q15526 300 aa24.55■■□□□ 1.52
ACTN4-210ENST00000588618 ENOX2Q16206 610 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms