RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 WDR63Q8IWG1 891 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 IL31RAQ8NI17 732 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 TRAPPC12Q8WVT3 735 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 SEPT1Q8WYJ6 367 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 TMEM176AQ96HP8 235 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 TMEM175Q9BSA9 504 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 CSRNP2Q9H175 543 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 CPNE5Q9HCH3 593 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 POLR3BQ9NW08 1133 aaPredicted RBP7.95□□□□□ -1.14
TPM4-210ENST00000588507 PCOLCE2Q9UKZ9 415 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
TPM4-210ENST00000588507 PDCD11Q14690 1871 aaKnown RBP7.95□□□□□ -1.14
TPM4-210ENST00000588507 GOLIM4O00461 696 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 NRP1O14786 923 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 FIBPO43427 364 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 SYPP08247 313 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 ATXN1LP0C7T5 689 aaKnown RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 CEBPBP17676 345 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 GRNP28799 593 aaKnown RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 HOXD12P35452 270 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 NFKB2Q00653 900 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 CREMQ03060 361 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 KIZQ2M2Z5 673 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 RRP12Q5JTH9 1297 aaKnown RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 AXDND1Q5T1B0 1012 aaPredicted RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 ARMCX6Q7L4S7 300 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 MFSD6LQ8IWD5 586 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 YAF2Q8IY57 180 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 RNF168Q8IYW5 571 aaPredicted RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 KIAA0319LQ8IZA0 1049 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 EAF2Q96CJ1 260 aaPredicted RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 ASB16Q96NS5 453 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 FAM193BQ96PV7 902 aaPredicted RBP7.94□□□□□ -1.14
TPM4-210ENST00000588507 PPP1R16BQ96T49 567 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 SENP7Q9BQF6 1050 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 TOR4AQ9NXH8 423 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 PILRBQ9UKJ0 227 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 MTORP42345 2549 aa7.94□□□□□ -1.14
TPM4-210ENST00000588507 PNMA6EA0A0J9YXQ4 647 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 GSTTP1A0A1W2PQM5 241 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 GSG1L2A8MUP6 293 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 NRG2O14511 850 aaPredicted RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 ATP9AO75110 1047 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 OFD1O75665 1012 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 GJB3O75712 270 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 DDHD2O94830 711 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 RHOP08100 348 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 GNAI3P08754 354 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 KLRC1P26715 233 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 HSD17B4P51659 736 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 TLE1Q04724 770 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 SLC5A9Q2M3M2 681 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 PEAR1Q5VY43 1037 aaPredicted RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 LYSMD4Q5XG99 296 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 RABEPKQ7Z6M1 372 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 ZC3H18Q86VM9 953 aaKnown RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 SRRM1Q8IYB3 904 aaKnown RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 GPR65Q8IYL9 337 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 SPRYD3Q8NCJ5 442 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 GIMAP8Q8ND71 665 aaPredicted RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 SETD7Q8WTS6 366 aaKnown RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 LGMNQ99538 433 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 TPSD1Q9BZJ3 242 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 IL17RBQ9NRM6 502 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 CHST7Q9NS84 486 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 DACT1Q9NYF0 836 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 MAP3K20Q9NYL2 800 aaKnown RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 ATXN2Q99700 1313 aaKnown RBP7.93□□□□□ -1.14
TPM4-210ENST00000588507 DOCK5Q9H7D0 1870 aa7.93□□□□□ -1.14
TPM4-210ENST00000588507 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 CHADO15335 359 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 NMT2O60551 498 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 STAM2O75886 525 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 EFEMP2O95967 443 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 ACTN2P35609 894 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 VIPR2P41587 438 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 PTGER3P43115 390 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 VAC14Q08AM6 782 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 NBR1Q14596 966 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 RTP5Q14D33 572 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 UVSSAQ2YD98 709 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 LONRF3Q496Y0 759 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 SYT13Q7L8C5 426 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 TMPRSS12Q86WS5 348 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 DAGLBQ8NCG7 672 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 TTC8Q8TAM2 541 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 URGCPQ8TCY9 931 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 SNRNP27Q8WVK2 155 aaKnown RBP7.92□□□□□ -1.14
TPM4-210ENST00000588507 SMARCD2Q92925 531 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 LPPQ93052 612 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 INPP4AQ96PE3 977 aaPredicted RBP7.92□□□□□ -1.14
TPM4-210ENST00000588507 TMEM209Q96SK2 561 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 CDC6Q99741 560 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.92□□□□□ -1.142e-11■□□□□ 8.1
TPM4-210ENST00000588507 PRDM16Q9HAZ2 1276 aa7.92□□□□□ -1.14
TPM4-210ENST00000588507 MARCH5Q9NX47 278 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms