RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 GIT1Q9Y2X7 761 aa20.06■□□□□ 0.8
CXXC1-210ENST00000587396 CACNA1GO43497 2377 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 INO80B-WBP1J3KQ70 363 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 CCT2P78371 535 aaKnown RBP20.05■□□□□ 0.8
CXXC1-210ENST00000587396 PFKPQ01813 784 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 FZD5Q13467 585 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 PPM1JQ5JR12 505 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 NPAS3Q8IXF0 933 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 SLC7A14Q8TBB6 771 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 BORCS6Q96GS4 357 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 RGL1Q9NZL6 768 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 PARP2Q9UGN5 583 aa20.05■□□□□ 0.8
CXXC1-210ENST00000587396 DDX25Q9UHL0 483 aaKnown RBP20.05■□□□□ 0.8
CXXC1-210ENST00000587396 MTCL1Q9Y4B5 1905 aaKnown RBP20.05■□□□□ 0.8
CXXC1-210ENST00000587396 MAP1BP46821 2468 aaKnown RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 PATJQ8NI35 1801 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 CASTOR2A6NHX0 329 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 SHISA7A6NL88 538 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 B4GALT5O43286 388 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 TBC1D4O60343 1298 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 NPTXRO95502 500 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 HNRNPA1P09651 372 aaKnown RBP eCLIP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 ARF4P18085 180 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 KCNA4P22459 653 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 PTENP60484 403 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 CREMQ03060 361 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 TSGA10IPQ3SY00 556 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 FAM171A1Q5VUB5 890 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 POTEHQ6S545 545 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 LNX1Q8TBB1 728 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 MCRS1Q96EZ8 462 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 TTPALQ9BTX7 342 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 RNF26Q9BY78 433 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 PRMT8Q9NR22 394 aaPredicted RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 DNMT3BQ9UBC3 853 aaKnown RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 VAV3Q9UKW4 847 aa20.04■□□□□ 0.8
CXXC1-210ENST00000587396 NDRG2Q9UN36 371 aaKnown RBP20.04■□□□□ 0.8
CXXC1-210ENST00000587396 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.03■□□□□ 0.8
CXXC1-210ENST00000587396 AXLP30530 894 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 YWHABP31946 246 aaKnown RBP20.03■□□□□ 0.8
CXXC1-210ENST00000587396 RFC5P40937 340 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 MAGEA9P43362 315 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 HSP90AA2PQ14568 343 aaPredicted RBP20.03■□□□□ 0.8
CXXC1-210ENST00000587396 PSMD5Q16401 504 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 AMHR2Q16671 573 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 XKR9Q5GH70 373 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 RSPO2Q6UXX9 243 aaPredicted RBP20.03■□□□□ 0.8
CXXC1-210ENST00000587396 ZNF852Q6ZMS4 543 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 GPR65Q8IYL9 337 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 TCP11Q8WWU5 503 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 LXNQ9BS40 222 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 PCDHA4Q9UN74 947 aa20.03■□□□□ 0.8
CXXC1-210ENST00000587396 SF3B1O75533 1304 aaKnown RBP eCLIP20.02■□□□□ 0.8
CXXC1-210ENST00000587396 ASAP2O43150 1006 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 XYLBO75191 536 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 KIF4AO95239 1232 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 P4HBP07237 508 aaKnown RBP20.02■□□□□ 0.8
CXXC1-210ENST00000587396 IRX6P78412 446 aaPredicted RBP20.02■□□□□ 0.8
CXXC1-210ENST00000587396 MBTD1Q05BQ5 628 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 NCBP1Q09161 790 aaKnown RBP20.02■□□□□ 0.8
CXXC1-210ENST00000587396 GRIK3Q13003 919 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 PPP2R5CQ13362 524 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 KRT32Q14532 448 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 INF2Q27J81 1249 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 PABPC1LQ4VXU2 614 aaKnown RBP20.02■□□□□ 0.8
CXXC1-210ENST00000587396 AXDND1Q5T1B0 1012 aaPredicted RBP20.02■□□□□ 0.8
CXXC1-210ENST00000587396 SKAP1Q86WV1 359 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 ASAP3Q8TDY4 903 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 CCDC51Q96ER9 411 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 MTRQ99707 1265 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 CXCL16Q9H2A7 254 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 XPNPEP1Q9NQW7 623 aa20.02■□□□□ 0.8
CXXC1-210ENST00000587396 NCAM2O15394 837 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 IFNAR1P17181 557 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 RPS9P46781 194 aaKnown RBP20.01■□□□□ 0.79
CXXC1-210ENST00000587396 CYP4A11Q02928 519 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 CTTNQ14247 550 aaKnown RBP20.01■□□□□ 0.79
CXXC1-210ENST00000587396 TANGO2Q6ICL3 276 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 PRR23BQ6ZRT6 265 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 EXOC8Q8IYI6 725 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 HACE1Q8IYU2 909 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 BLIDQ8IZY5 108 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 PIK3R5Q8WYR1 880 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 DYDC2Q96IM9 177 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
CXXC1-210ENST00000587396 JAKMIP1Q96N16 626 aaKnown RBP20.01■□□□□ 0.79
CXXC1-210ENST00000587396 NELL2Q99435 816 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 RAB23Q9ULC3 237 aa20.01■□□□□ 0.79
CXXC1-210ENST00000587396 TDRD15B5MCY1 1934 aaKnown RBP20■□□□□ 0.79
CXXC1-210ENST00000587396 NID2Q14112 1375 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 M0R2N6 131 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
CXXC1-210ENST00000587396 TDGF1P13385 188 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 IGFBP6P24592 240 aaPredicted RBP20■□□□□ 0.79
CXXC1-210ENST00000587396 OR1D2P34982 312 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 ADCY1Q08828 1119 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 CAPSQ13938 189 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 GRM2Q14416 872 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 SLC5A9Q2M3M2 681 aa20■□□□□ 0.79
CXXC1-210ENST00000587396 AIFM3Q96NN9 605 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms