RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 TDGQ13569 410 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 USP41Q3LFD5 358 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 RTP2Q5QGT7 225 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 CWF19L1Q69YN2 538 aaKnown RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 PALB2Q86YC2 1186 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 HASPINQ8TF76 798 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 RIN2Q8WYP3 895 aaPredicted RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 SMG7Q92540 1137 aaKnown RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 ATOH1Q92858 354 aaPredicted RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 KIFC3Q9BVG8 833 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 RHOBTB2Q9BYZ6 727 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 CCDC113Q9H0I3 377 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 FOXP1Q9H334 677 aaPredicted RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 WDR6Q9NNW5 1121 aaKnown RBP15.48■□□□□ 0.07
ATG4D-206ENST00000586863 SNTG2Q9NY99 539 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 DUSP12Q9UNI6 340 aa15.48■□□□□ 0.07
ATG4D-206ENST00000586863 ARHGEF35A5YM69 484 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 N4BP3O15049 544 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 KIF4AO95239 1232 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 PAPLNO95428 1278 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 PRKCBP05771 671 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 CYP11B2P19099 503 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 NUBP1P53384 320 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 ORC2Q13416 577 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-206ENST00000586863 TUSC3Q13454 348 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 PRPF4BQ13523 1007 aaKnown RBP15.47■□□□□ 0.07
ATG4D-206ENST00000586863 NBR1Q14596 966 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 ECM1Q16610 540 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 MAPK6Q16659 721 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 TTC38Q5R3I4 469 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 EEF1DP3Q658K8 133 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 ASTLQ6HA08 431 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-206ENST00000586863 ELMSAN1Q6PJG2 1045 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 PRSS55Q6UWB4 352 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-206ENST00000586863 GPR65Q8IYL9 337 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 ERMNQ8TAM6 284 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 MYADMQ96S97 322 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 LLPHQ9BRT6 129 aaKnown RBP15.47■□□□□ 0.07
ATG4D-206ENST00000586863 C2orf40Q9H1Z8 148 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 MFSD1Q9H3U5 465 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 POLD4Q9HCU8 107 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.47■□□□□ 0.07
ATG4D-206ENST00000586863 FNIP2Q9P278 1114 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 DPP7Q9UHL4 492 aa15.47■□□□□ 0.07
ATG4D-206ENST00000586863 SF3B1O75533 1304 aaKnown RBP eCLIP15.46■□□□□ 0.072e-6■■■■■ 122.8
ATG4D-206ENST00000586863 ACKR2O00590 384 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 NARSO43776 548 aaKnown RBP15.46■□□□□ 0.07
ATG4D-206ENST00000586863 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
ATG4D-206ENST00000586863 TADA2AO75478 443 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 LIG1P18858 919 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 GBP2P32456 591 aaPredicted RBP15.46■□□□□ 0.07
ATG4D-206ENST00000586863 NAMPTP43490 491 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 NAB2Q15742 525 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 TMEM132AQ24JP5 1023 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 LILRA6Q6PI73 481 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 CYP26C1Q6V0L0 522 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 NOSTRINQ8IVI9 506 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 FLCNQ8NFG4 579 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 FBXO18Q8NFZ0 1043 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 HDAC7Q8WUI4 952 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 RSAD2Q8WXG1 361 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 STAMQ92783 540 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 PLEKHA4Q9H4M7 779 aa15.46■□□□□ 0.07
ATG4D-206ENST00000586863 CITO14578 2027 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 GFRA3O60609 400 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 C1RP00736 705 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 NPR3P17342 541 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 CLCN5P51795 746 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 C4orf32Q8N8J7 132 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 DEPTORQ8TB45 409 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 IRF2BPLQ9H1B7 796 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 BHMT2Q9H2M3 363 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 ZDHHC7Q9NXF8 308 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 IGSF9Q9P2J2 1179 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 EPS15L1Q9UBC2 864 aa15.45■□□□□ 0.06
ATG4D-206ENST00000586863 NOTCH4Q99466 2003 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 ZNF292O60281 2723 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 THP07101 528 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 MUTP22033 750 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 CCT6AP40227 531 aaKnown RBP15.44■□□□□ 0.06
ATG4D-206ENST00000586863 TRAPPC10P48553 1259 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 RBM25P49756 843 aaKnown RBP15.44■□□□□ 0.06
ATG4D-206ENST00000586863 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.06
ATG4D-206ENST00000586863 HMGN5P82970 282 aaKnown RBP15.44■□□□□ 0.06
ATG4D-206ENST00000586863 CREMQ03060 361 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 PPP2R5AQ15172 486 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 GET4Q7L5D6 327 aaPredicted RBP15.44■□□□□ 0.06
ATG4D-206ENST00000586863 SIX5Q8N196 739 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 KIF2CQ99661 725 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 ADPGKQ9BRR6 497 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 TTPALQ9BTX7 342 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 PRKD2Q9BZL6 878 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 PIDD1Q9HB75 910 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 FBXW11Q9UKB1 542 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 FBXL21Q9UKT6 434 aa15.44■□□□□ 0.06
ATG4D-206ENST00000586863 GDAQ9Y2T3 454 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms