RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 VN1R2Q8NFZ6 395 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 ADAMTS19Q8TE59 1207 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 ZNF396Q96N95 335 aaPredicted RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 CDCA3Q99618 268 aaPredicted RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 TCF25Q9BQ70 676 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 APOL6Q9BWW8 343 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 MRPL4Q9BYD3 311 aaKnown RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 SCAND2PQ9GZW5 306 aaPredicted RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 GBP3Q9H0R5 595 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 CXCL16Q9H2A7 254 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 GRPEL1Q9HAV7 217 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 NGRNQ9NPE2 291 aaKnown RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 CLDND1Q9NY35 253 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 CLEC1BQ9P126 229 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 STK39Q9UEW8 545 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 CCDC39Q9UFE4 941 aa9.48□□□□□ -0.89
ATG4D-202ENST00000585437 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
ATG4D-202ENST00000585437 FRMD3A2A2Y4 597 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 GRXCR2A6NFK2 248 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 C2orf71A6NGG8 1288 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 HIDE1A8MVS5 230 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 H0YCG3 227 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 DLL1O00548 723 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 FAM189A1O60320 539 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 TOM1L1O75674 476 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 PPP1R37O75864 691 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 CSPG5O95196 566 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
ATG4D-202ENST00000585437 PIGRP01833 764 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 CTSAP10619 480 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 MCF2P10911 925 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 TXLNAP40222 546 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 GRM5P41594 1212 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 NRIP1P48552 1158 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 SMTNP53814 917 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 COASYQ13057 564 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 TUSC3Q13454 348 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 SMC1AQ14683 1233 aaKnown RBP9.47□□□□□ -0.89
ATG4D-202ENST00000585437 STK38Q15208 465 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 E2F4Q16254 413 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 PUS10Q3MIT2 529 aaKnown RBP9.47□□□□□ -0.89
ATG4D-202ENST00000585437 ZSCAN23Q3MJ62 389 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 ZNF568Q3ZCX4 644 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 XKR4Q5GH76 650 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 PLPP4Q5VZY2 271 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 MPZL3Q6UWV2 235 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 HAUS6Q7Z4H7 955 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 VPS52Q8N1B4 723 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 CEP120Q8N960 986 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 MRPL43Q8N983 215 aaKnown RBP9.47□□□□□ -0.89
ATG4D-202ENST00000585437 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 RASSF8Q8NHQ8 419 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
ATG4D-202ENST00000585437 DNAJC19Q96DA6 116 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 TARS2Q9BW92 718 aaKnown RBP9.47□□□□□ -0.89
ATG4D-202ENST00000585437 ST6GALNAC4Q9H4F1 302 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 ENTPD7Q9NQZ7 604 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 SNTG2Q9NY99 539 aa9.47□□□□□ -0.89
ATG4D-202ENST00000585437 MYMKA6NI61 221 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 F8W810 466 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 H3BQ06 376 aaPredicted RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 MEFVO15553 781 aaPredicted RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 CUTAO60888 179 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 LILRB3O75022 631 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 FAM13AO94988 1023 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 SOD2P04179 222 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 ALDH2P05091 517 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 LIG1P18858 919 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 GTF2BQ00403 316 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 MCL1Q07820 350 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 DHX8Q14562 1220 aaKnown RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 NOLC1Q14978 699 aaKnown RBP eCLIP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 PTPN14Q15678 1187 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 SHC4Q6S5L8 630 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 CCDC73Q6ZRK6 1079 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 TMC7Q7Z402 723 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 APBB1IPQ7Z5R6 666 aaPredicted RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 GPR65Q8IYL9 337 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 KCNG4Q8TDN1 519 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 FAM193BQ96PV7 902 aaPredicted RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 PPP1R10Q96QC0 940 aaKnown RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 RPS6KC1Q96S38 1066 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 HERC2P3Q9BVR0 1158 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 STRA6Q9BX79 667 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 HAPLN2Q9GZV7 340 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 TLE6Q9H808 572 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 KLK14Q9P0G3 267 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 TFIP11Q9UBB9 837 aaKnown RBP9.46□□□□□ -0.9
ATG4D-202ENST00000585437 PARP2Q9UGN5 583 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 FAN1Q9Y2M0 1017 aa9.46□□□□□ -0.9
ATG4D-202ENST00000585437 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 K7ENM7 598 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 PER2O15055 1255 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 MBTPS2O43462 519 aa9.45□□□□□ -0.9
ATG4D-202ENST00000585437 TBCAO75347 108 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms