RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 ATXN2LQ8WWM7 1075 aaKnown RBP17.81■□□□□ 0.44
ERBB2-222ENST00000584908 HVCN1Q96D96 273 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 TMEM169Q96HH4 297 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
ERBB2-222ENST00000584908 GBP3Q9H0R5 595 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 NGRNQ9NPE2 291 aaKnown RBP17.81■□□□□ 0.44
ERBB2-222ENST00000584908 KLK14Q9P0G3 267 aa17.81■□□□□ 0.44
ERBB2-222ENST00000584908 FAM237AA0A1B0GTK4 181 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 NRP1O14786 923 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 POLR2DO15514 142 aaKnown RBP17.8■□□□□ 0.44
ERBB2-222ENST00000584908 ALDH2P05091 517 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 NMT1P30419 496 aaKnown RBP17.8■□□□□ 0.44
ERBB2-222ENST00000584908 AMPD3Q01432 767 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 NOLC1Q14978 699 aaKnown RBP eCLIP17.8■□□□□ 0.44
ERBB2-222ENST00000584908 NAB2Q15742 525 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 CTC1Q2NKJ3 1217 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 ALKAL1Q6UXT8 129 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 CEP120Q8N960 986 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 BCL7CQ8WUZ0 217 aaPredicted RBP17.8■□□□□ 0.44
ERBB2-222ENST00000584908 HLA-CQ95604 372 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 PPP2R3CQ969Q6 453 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 DHX58Q96C10 678 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
ERBB2-222ENST00000584908 RPS6KC1Q96S38 1066 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 TRIM9Q9C026 710 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 ZHX3Q9H4I2 956 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 KCNH3Q9ULD8 1083 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 HPSEQ9Y251 543 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 FAN1Q9Y2M0 1017 aa17.8■□□□□ 0.44
ERBB2-222ENST00000584908 HYAL1Q12794 435 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 TUSC3Q13454 348 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 SKIV2LQ15477 1246 aaKnown RBP17.79■□□□□ 0.44
ERBB2-222ENST00000584908 PABPC5Q96DU9 382 aaKnown RBP17.79■□□□□ 0.44
ERBB2-222ENST00000584908 C7orf25Q9BPX7 421 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 TCHPQ9BT92 498 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 CCDC94Q9BW85 323 aaPredicted RBP17.79■□□□□ 0.44
ERBB2-222ENST00000584908 HAPLN2Q9GZV7 340 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 ZBP1Q9H171 429 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 CXCL16Q9H2A7 254 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 TOPORSQ9NS56 1045 aaPredicted RBP17.79■□□□□ 0.44
ERBB2-222ENST00000584908 GDAQ9Y2T3 454 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 IRAK3Q9Y616 596 aa17.79■□□□□ 0.44
ERBB2-222ENST00000584908 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 CLDN3O15551 220 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 THP07101 528 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 ZC2HC1CQ53FD0 456 aaPredicted RBP17.78■□□□□ 0.44
ERBB2-222ENST00000584908 ADGRD2Q7Z7M1 963 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 ZBTB33Q86T24 672 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
ERBB2-222ENST00000584908 STAMQ92783 540 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 PPP1R10Q96QC0 940 aaKnown RBP17.78■□□□□ 0.44
ERBB2-222ENST00000584908 VN1R3Q9BXE9 311 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 UBE2ZQ9H832 354 aaPredicted RBP17.78■□□□□ 0.44
ERBB2-222ENST00000584908 PANK4Q9NVE7 773 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 PCDHGC5Q9Y5F6 944 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 STYXL1Q9Y6J8 313 aa17.78■□□□□ 0.44
ERBB2-222ENST00000584908 CUL9Q8IWT3 2517 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 A0A0B4J269 797 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 FSD2A1L4K1 749 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 HNRNPDLO14979 420 aaKnown RBP17.77■□□□□ 0.44
ERBB2-222ENST00000584908 FAM189A1O60320 539 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 NR1I2O75469 434 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 SLFN14P0C7P3 912 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 IDEP14735 1019 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 PFKFB1P16118 471 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 LIG4P49917 911 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 YARSP54577 528 aaKnown RBP17.77■□□□□ 0.44
ERBB2-222ENST00000584908 MRPS5P82675 430 aaKnown RBP17.77■□□□□ 0.44
ERBB2-222ENST00000584908 ALCAMQ13740 583 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 AAK1Q2M2I8 961 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 HERC4Q5GLZ8 1057 aaPredicted RBP17.77■□□□□ 0.44
ERBB2-222ENST00000584908 SLC39A4Q6P5W5 647 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 TMC7Q7Z402 723 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 BICD1Q96G01 975 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 SNX27Q96L92 541 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 ACAP3Q96P50 834 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 CDCA3Q99618 268 aaPredicted RBP17.77■□□□□ 0.44
ERBB2-222ENST00000584908 TCF25Q9BQ70 676 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
ERBB2-222ENST00000584908 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 USP25Q9UHP3 1055 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 TTC28Q96AY4 2481 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 VCANP13611 3396 aa17.77■□□□□ 0.44
ERBB2-222ENST00000584908 NCOR1O75376 2440 aa17.77■□□□□ 0.43
ERBB2-222ENST00000584908 MEFVO15553 781 aaPredicted RBP17.76■□□□□ 0.43
ERBB2-222ENST00000584908 ACTN4O43707 911 aaKnown RBP17.76■□□□□ 0.43
ERBB2-222ENST00000584908 CTSAP10619 480 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 KCNE1P15382 129 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 OR1G1P47890 313 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 EHHADHQ08426 723 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 COASYQ13057 564 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 ADAM15Q13444 863 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 SMC1AQ14683 1233 aaKnown RBP17.76■□□□□ 0.43
ERBB2-222ENST00000584908 KYAT1Q16773 422 aa17.76■□□□□ 0.43
ERBB2-222ENST00000584908 L1TD1Q5T7N2 865 aaKnown RBP17.76■□□□□ 0.43
ERBB2-222ENST00000584908 VPS52Q8N1B4 723 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms