RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 WNT8AQ9H1J5 351 aa18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 RBAKQ9NYW8 714 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CLTAP09496 248 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ACOT2P49753 483 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 RAB27AP51159 221 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 VAMP7P51809 220 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ZNF75DP51815 510 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 DSC3Q14574 896 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PSMD6Q15008 389 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 UBXN11Q5T124 520 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CEP120Q8N960 986 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TRIM6Q9C030 488 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NDST4Q9H3R1 872 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TMEM39AQ9NV64 488 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 INTS13Q9NVM9 706 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
CDK5RAP3-230ENST00000584042 KIAA0355O15063 1070 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NBNO60934 754 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 AFPP02771 609 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CXCL10P02778 98 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CDC25BP30305 580 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 RFC2P35250 354 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TNFSF9P41273 254 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 SURF1Q15526 300 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TCERG1LQ5VWI1 586 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PLEKHO2Q8TD55 490 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PARD3BQ8TEW8 1205 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 APBB2Q92870 758 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CCDC94Q9BW85 323 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 FTHL17Q9BXU8 183 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 EIF2AQ9BY44 585 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 OSBPL7Q9BZF2 842 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PPP1R12CQ9BZL4 782 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 VPS16Q9H269 839 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TMX1Q9H3N1 280 aa18.17■□□□□ 0.5
CDK5RAP3-230ENST00000584042 STX10O60499 249 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 N4BP1O75113 896 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 IL18RAPO95256 599 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ADCY5O95622 1261 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TRIM49P0CI25 452 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 TRIM49CP0CI26 452 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 STAG3L1P0CL83 205 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CLDN10P78369 228 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NR1I3Q14994 352 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ENOX2Q16206 610 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 PLEKHG4Q58EX7 1191 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 FKBP15Q5T1M5 1219 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 HACE1Q8IYU2 909 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CGRRF1Q99675 332 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 RPF1Q9H9Y2 349 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 FAM105AQ9NUU6 356 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 LTBP2Q14767 1821 aa18.16■□□□□ 0.5
CDK5RAP3-230ENST00000584042 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 LRRIQ3A6PVS8 624 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 CXCL8P10145 99 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 GTF2H1P32780 548 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 KCNH2Q12809 1159 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 GPNMBQ14956 572 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 SEZ6Q53EL9 994 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 C1orf220Q5T0J3 134 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 SEPT8Q92599 483 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 ACAP3Q96P50 834 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 FNBP1Q96RU3 617 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 NXF3Q9H4D5 531 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 IPPQ9Y573 584 aa18.15■□□□□ 0.5
CDK5RAP3-230ENST00000584042 A0A1W2PQC6 194 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 GTPBP10A4D1E9 387 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PES1O00541 588 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PMM2O15305 246 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 P4HA2O15460 535 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MGEA5O60502 916 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 RECQL4O94761 1208 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SKIP12755 728 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CYP2C18P33260 490 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PBX1P40424 430 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 FMO5P49326 533 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 AP3M2P53677 418 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 UBXN1Q04323 297 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 WDR49Q8IV35 697 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CD302Q8IX05 232 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SMG8Q8ND04 991 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CCDC127Q96BQ5 260 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ABHD8Q96I13 439 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SNX27Q96L92 541 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ASB7Q9H672 318 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TOPORSQ9NS56 1045 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PCDHB2Q9Y5E7 798 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms