RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 HACE1Q8IYU2 909 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 CEP120Q8N960 986 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 ENOX1Q8TC92 643 aaKnown RBP11.94□□□□□ -0.5
TOP3A-216ENST00000583804 PDLIM2Q96JY6 352 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 FAM213AQ9BRX8 229 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 CCDC94Q9BW85 323 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-216ENST00000583804 SRRTQ9BXP5 876 aaKnown RBP11.94□□□□□ -0.5
TOP3A-216ENST00000583804 UBE2OQ9C0C9 1292 aaKnown RBP11.94□□□□□ -0.5
TOP3A-216ENST00000583804 HSD3B7Q9H2F3 369 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 NXF3Q9H4D5 531 aaKnown RBP11.94□□□□□ -0.5
TOP3A-216ENST00000583804 SNTG2Q9NY99 539 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 HSPBP1Q9NZL4 362 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 PARP2Q9UGN5 583 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 LRFN2Q9ULH4 789 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 TRAF3IP3Q9Y228 551 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 IPPQ9Y573 584 aa11.94□□□□□ -0.5
TOP3A-216ENST00000583804 LTBP2Q14767 1821 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 OGTO15294 1046 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 EXOC3O60645 756 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 UPP2O95045 317 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 CAVIN2O95810 425 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 ITGA4P13612 1032 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 NR2F2P24468 414 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 AKAP5P24588 427 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 RPL13P26373 211 aaKnown RBP11.93□□□□□ -0.5
TOP3A-216ENST00000583804 FAM189BP81408 668 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 LRRC63Q05C16 580 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 ADAM9Q13443 819 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-216ENST00000583804 ZBTB41Q5SVQ8 909 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 CEP135Q66GS9 1140 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 XXYLT1Q8NBI6 393 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 RDH13Q8NBN7 331 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 SMG8Q8ND04 991 aaKnown RBP11.93□□□□□ -0.5
TOP3A-216ENST00000583804 LPPQ93052 612 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 PGBD4Q96DM1 585 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-216ENST00000583804 ACAP3Q96P50 834 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 TRAIPQ9BWF2 469 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 MTIF3Q9H2K0 278 aaKnown RBP11.93□□□□□ -0.5
TOP3A-216ENST00000583804 RNF39Q9H2S5 420 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 TAB2Q9NYJ8 693 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 PCDHB7Q9Y5E2 793 aa11.93□□□□□ -0.5
TOP3A-216ENST00000583804 ESPNB1AK53 854 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 IKBKBO14920 756 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 KIAA0391O15091 583 aaKnown RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 CETN3O15182 167 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 EXTL3O43909 919 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 ZNF623O75123 536 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 EOMESO95936 686 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 STAG3L1P0CL83 205 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 CDK11BP21127 795 aaKnown RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 GRM5P41594 1212 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 WDR5P61964 334 aaKnown RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 DEFB103AP81534 67 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 KYAT1Q16773 422 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 EDRF1Q3B7T1 1238 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 C12orf56Q8IXR9 622 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 GPD1LQ8N335 351 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 HERVK_113Q902F9 699 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 CNOT6LQ96LI5 555 aaKnown RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 KLK14Q9P0G3 267 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
TOP3A-216ENST00000583804 FRMD4BQ9Y2L6 1034 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 SLC4A7Q9Y6M7 1214 aa11.92□□□□□ -0.5
TOP3A-216ENST00000583804 ZNF233A6NK53 670 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 MEIS3P2A8K0S8 358 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 KCNJ18B7U540 433 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 PES1O00541 588 aaKnown RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 RECQL4O94761 1208 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 SERPINC1P01008 464 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 CLTAP09496 248 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 TNFSF9P41273 254 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 YARSP54577 528 aaKnown RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 MYBPC2Q14324 1141 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 SHHQ15465 462 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 CCDC40Q4G0X9 1142 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 C9orf50Q5SZB4 431 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 TMCO2Q7Z6W1 182 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 NPAS4Q8IUM7 802 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 SLC9A9Q8IVB4 645 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 RNPC3Q96LT9 517 aaKnown RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 GDF15Q99988 308 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 RPF1Q9H9Y2 349 aaKnown RBP11.91□□□□□ -0.5
TOP3A-216ENST00000583804 KIAA1586Q9HCI6 787 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 DMAC2Q9NW81 257 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 TMEM161AQ9NX61 479 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 IFNKQ9P0W0 207 aa11.91□□□□□ -0.5
TOP3A-216ENST00000583804 MAGEC2Q9UBF1 373 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms