RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PSAPL1Q6NUJ1 521 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 LRSAM1Q6UWE0 723 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 CACNA2D4Q7Z3S7 1137 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 CSGALNACT1Q8TDX6 532 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 PIK3R5Q8WYR1 880 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 MCRS1Q96EZ8 462 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 B3GALT6Q96L58 329 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 LHX6Q9UPM6 363 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 PCDHGA5Q9Y5G8 931 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 PIAS3Q9Y6X2 628 aa12.41□□□□□ -0.42
CASC3-208ENST00000583649 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 ESYT2A0FGR8 921 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 TM4SF5O14894 197 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 ZNF263O14978 683 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 AXIN1O15169 862 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 PAPSS2O95340 614 aaPredicted RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 LRG1P02750 347 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 PTPN2P17706 415 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 PSMC3P17980 439 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 ELF1P32519 619 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 SATB1Q01826 763 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 NUCB1Q02818 461 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 PTH1RQ03431 593 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 DGKKQ5KSL6 1271 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 FAM171A1Q5VUB5 890 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 RNF43Q68DV7 783 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 HEATR6Q6AI08 1181 aaKnown RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 CRYGNQ8WXF5 182 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 ING5Q8WYH8 240 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 ARRDC1-AS1Q9H2J1 176 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 MTCL1Q9Y4B5 1905 aaKnown RBP12.4□□□□□ -0.42
CASC3-208ENST00000583649 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.42
CASC3-208ENST00000583649 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 ZBTB43O43298 467 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 RHOP08100 348 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 HOXA6P31267 233 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 RFC5P40937 340 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 NOVA1P51513 510 aaKnown RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 USP11P51784 963 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 PSMC5P62195 406 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 FOXC1Q12948 553 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 RAB33AQ14088 237 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 TFDP1Q14186 410 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 SF3A2Q15428 464 aaKnown RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 UGCGQ16739 394 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 PRPF31Q8WWY3 499 aaKnown RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 MAP4K1Q92918 833 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 E2F7Q96AV8 911 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 ZFP42Q96MM3 310 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 CLSTN3Q9BQT9 956 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 ZMYND12Q9H0C1 365 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 CSRNP2Q9H175 543 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 UNC45AQ9H3U1 944 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 ZNF334Q9HCZ1 680 aaPredicted RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 VPS45Q9NRW7 570 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 DNMT3BQ9UBC3 853 aaKnown RBP12.39□□□□□ -0.43
CASC3-208ENST00000583649 PKD1L2Q7Z442 2459 aa12.39□□□□□ -0.43
CASC3-208ENST00000583649 MSH4O15457 936 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 MICAL2O94851 1124 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 CHRNB1P11230 501 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 GDI1P31150 447 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
CASC3-208ENST00000583649 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
CASC3-208ENST00000583649 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
CASC3-208ENST00000583649 SPIRE1Q08AE8 756 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 PTGDRQ13258 359 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 GRM2Q14416 872 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 MXD4Q14582 209 aaPredicted RBP12.38□□□□□ -0.43
CASC3-208ENST00000583649 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 CYP4A22Q5TCH4 519 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 OTUD6AQ7L8S5 288 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 WDR5BQ86VZ2 330 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 SYNPOQ8N3V7 929 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 CCDC148Q8NFR7 591 aa12.38□□□□□ -0.43
CASC3-208ENST00000583649 LNX1Q8TBB1 728 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms