RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 RECQL4O94761 1208 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 DDHD2O94830 711 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 SLC10A6Q3KNW5 377 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 EPC2Q52LR7 807 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 ZNF280BQ86YH2 543 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 THNSL1Q8IYQ7 743 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 ERCC4Q92889 916 aaPredicted RBP23.65■■□□□ 1.38
TSEN54-208ENST00000583173 GSDMAQ96QA5 445 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 NRDE2Q9H7Z3 1164 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 KLK14Q9P0G3 267 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 GDAQ9Y2T3 454 aa23.65■■□□□ 1.38
TSEN54-208ENST00000583173 UBE4BO95155 1302 aa23.64■■□□□ 1.38
TSEN54-208ENST00000583173 PTGESO14684 152 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 OGTO15294 1046 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 RB1P06400 928 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 NAB2Q15742 525 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 SEZ6Q53EL9 994 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 LRRC43Q8N309 656 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 MRPL9Q9BYD2 267 aaKnown RBP23.64■■□□□ 1.37
TSEN54-208ENST00000583173 CERS4Q9HA82 394 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 MTMR10Q9NXD2 777 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 ANKFY1Q9P2R3 1169 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 PLAGL2Q9UPG8 496 aa23.64■■□□□ 1.37
TSEN54-208ENST00000583173 LPXNO60711 386 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 CLTAP09496 248 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 GARTP22102 1010 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 MLH1P40692 756 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 DSC1Q08554 894 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 ZBTB41Q5SVQ8 909 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 CRELD2Q6UXH1 353 aaPredicted RBP23.63■■□□□ 1.37
TSEN54-208ENST00000583173 DEFB123Q8N688 67 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 ACAP3Q96P50 834 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 CCDC94Q9BW85 323 aaPredicted RBP23.63■■□□□ 1.37
TSEN54-208ENST00000583173 PLVAPQ9BX97 442 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 CPSF3Q9UKF6 684 aaKnown RBP23.63■■□□□ 1.37
TSEN54-208ENST00000583173 INPP5FQ9Y2H2 1132 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 RWDD3Q9Y3V2 267 aa23.63■■□□□ 1.37
TSEN54-208ENST00000583173 POMCP01189 267 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 SCNN1GP51170 649 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 OSTNP61366 133 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 SNRPFP62306 86 aaKnown RBP23.62■■□□□ 1.37
TSEN54-208ENST00000583173 POU5F1Q01860 360 aaKnown RBP23.62■■□□□ 1.37
TSEN54-208ENST00000583173 KYAT1Q16773 422 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 KNOP1Q1ED39 458 aaKnown RBP23.62■■□□□ 1.37
TSEN54-208ENST00000583173 COLGALT2Q8IYK4 626 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 SYCP3Q8IZU3 236 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 COLGALT1Q8NBJ5 622 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 ZSWIM2Q8NEG5 633 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 URGCPQ8TCY9 931 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 GPT2Q8TD30 523 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 TMEM174Q8WUU8 243 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 ARNTL2Q8WYA1 636 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 MSTO1Q9BUK6 570 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 GBP3Q9H0R5 595 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 KCTD10Q9H3F6 313 aa23.62■■□□□ 1.37
TSEN54-208ENST00000583173 HOOK1Q9UJC3 728 aaKnown RBP23.62■■□□□ 1.37
TSEN54-208ENST00000583173 AGO2Q9UKV8 859 aaKnown RBP23.62■■□□□ 1.37
TSEN54-208ENST00000583173 TTC26A0AVF1 554 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 H3BNC9 293 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 RFXAPO00287 272 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 SMC2O95347 1197 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 GALTP07902 379 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 HARSP12081 509 aaKnown RBP23.61■■□□□ 1.37
TSEN54-208ENST00000583173 KCNE1P15382 129 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 TNFSF9P41273 254 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 P2RX5Q93086 422 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 CCDC47Q96A33 483 aaKnown RBP23.61■■□□□ 1.37
TSEN54-208ENST00000583173 SNX27Q96L92 541 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 FAM161BQ96MY7 647 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 ZMAT2Q96NC0 199 aaKnown RBP23.61■■□□□ 1.37
TSEN54-208ENST00000583173 GUCD1Q96NT3 240 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 CBWD1Q9BRT8 395 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 PLEKHA5Q9HAU0 1116 aa23.61■■□□□ 1.37
TSEN54-208ENST00000583173 SMIM28A0A1B0GU29 152 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 LAG3P18627 525 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 ENOX2Q16206 610 aaKnown RBP23.6■■□□□ 1.37
TSEN54-208ENST00000583173 COBLL1Q53SF7 1204 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 KCNT2Q6UVM3 1135 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 NELFCDQ8IXH7 590 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 C12orf56Q8IXR9 622 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 POMGNT1Q8WZA1 660 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 SMARCE1Q969G3 411 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 PPP1R10Q96QC0 940 aaKnown RBP23.6■■□□□ 1.37
TSEN54-208ENST00000583173 PRDM12Q9H4Q4 367 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 CNTN3Q9P232 1028 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 DNAJB4Q9UDY4 337 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 TRANK1O15050 2925 aa23.6■■□□□ 1.37
TSEN54-208ENST00000583173 POU3F3P20264 500 aaPredicted RBP23.59■■□□□ 1.37
TSEN54-208ENST00000583173 BMP6P22004 513 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 MATR3P43243 847 aaKnown RBP eCLIP23.59■■□□□ 1.37
TSEN54-208ENST00000583173 ACOT2P49753 483 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 BCAR1P56945 870 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 ADGRE1Q14246 886 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 ZBTB6Q15916 424 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 GUF1Q8N442 669 aaKnown RBP23.59■■□□□ 1.37
TSEN54-208ENST00000583173 KLHL23Q8NBE8 558 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 FBXO22Q8NEZ5 403 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 FBXL18Q96ME1 805 aa23.59■■□□□ 1.37
TSEN54-208ENST00000583173 CDX2Q99626 313 aaPredicted RBP23.59■■□□□ 1.37
TSEN54-208ENST00000583173 TMEM175Q9BSA9 504 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms