RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 HSD17B4P51659 736 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 PRAMEP78395 509 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 RAD51Q06609 339 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 HIF1AQ16665 826 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 TRMT10CQ7L0Y3 403 aaKnown RBP17.33■□□□□ 0.37
ERBB2-214ENST00000583038 ULK4Q96C45 1275 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 EPAS1Q99814 870 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 SMG5Q9UPR3 1016 aaKnown RBP17.33■□□□□ 0.37
ERBB2-214ENST00000583038 GOLGA8MH3BSY2 632 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 MAGEB2O15479 319 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 MTHFD1LQ6UB35 978 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 ELMOD1Q8N336 334 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 EXT2Q93063 718 aa17.33■□□□□ 0.37
ERBB2-214ENST00000583038 TYK2P29597 1187 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 SERPINB4P48594 390 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 RBP5P82980 135 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 MAPRE2Q15555 327 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 TRAPPC11Q7Z392 1133 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 SEPT1Q8WYJ6 367 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 ALKBH8Q96BT7 664 aaKnown RBP17.33■□□□□ 0.36
ERBB2-214ENST00000583038 WDR24Q96S15 920 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 GTSE1Q9NYZ3 720 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 CYP26A1O43174 497 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 CDH16O75309 829 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 ITIH2P19823 946 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 DPF2Q92785 391 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 VCPKMTQ9H867 229 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 XAB2Q9HCS7 855 aaKnown RBP17.33■□□□□ 0.36
ERBB2-214ENST00000583038 AMACRQ9UHK6 382 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.36
ERBB2-214ENST00000583038 IQCA1LA6NCM1 817 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 APOL1O14791 398 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 KRT17Q04695 432 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 MFSD14CQ5VZR4 134 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 WWP1Q9H0M0 922 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 RFC5P40937 340 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 ARSEP51690 589 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 NAB2Q15742 525 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 HP1BP3Q5SSJ5 553 aaPredicted RBP17.32■□□□□ 0.36
ERBB2-214ENST00000583038 LRIG3Q6UXM1 1119 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 BNIP3LO60238 219 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 NOP14P78316 857 aaKnown RBP17.32■□□□□ 0.36
ERBB2-214ENST00000583038 CCZ1BP86790 482 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 CCZ1P86791 482 aaPredicted RBP17.32■□□□□ 0.36
ERBB2-214ENST00000583038 SGSM1Q2NKQ1 1148 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 E4F1Q66K89 784 aaPredicted RBP17.32■□□□□ 0.36
ERBB2-214ENST00000583038 CCNYL1Q8N7R7 359 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 SMARCAD1Q9H4L7 1026 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 SP110Q9HB58 689 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 KCNQ2O43526 872 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 RPA1P27694 616 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 HSPA9P38646 679 aaKnown RBP17.32■□□□□ 0.36
ERBB2-214ENST00000583038 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERBB2-214ENST00000583038 GALCP54803 685 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 CDR2Q01850 454 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 ZBTB17Q13105 803 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 WDR72Q3MJ13 1102 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 TTC23LQ6PF05 361 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 C1orf228Q6PIY5 440 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 CDC26Q8NHZ8 85 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 CXorf38Q8TB03 319 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 FAM151AQ8WW52 585 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
ERBB2-214ENST00000583038 PI4K2BG5E9Z4 385 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PSMD3O43242 534 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 TXNP10599 105 aaKnown RBP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 RASA1P20936 1047 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 SYN2Q92777 582 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 ABCA6Q8N139 1617 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 TRAPPC3O43617 180 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PFDN1O60925 122 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PDHBP11177 359 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 HMGCS2P54868 508 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 STK4Q13043 487 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PIGHQ14442 188 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 C1orf146Q5VVC0 180 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 BTBD8Q5XKL5 378 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PRR5LQ6MZQ0 368 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PIP4K2CQ8TBX8 421 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 TRIM54Q9BYV2 358 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 MRGBPQ9NV56 204 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 ANTXR2P58335 489 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 FMR1Q06787 632 aaKnown RBP eCLIP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 RDM1Q8NG50 284 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 C1orf54Q8WWF1 131 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PHF2O75151 1096 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 PPP1R37O75864 691 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 NR3C2P08235 984 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 GYS2P54840 703 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 EIF3EP60228 445 aaKnown RBP17.31■□□□□ 0.36
ERBB2-214ENST00000583038 VSNL1P62760 191 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 MTF1Q14872 753 aa17.31■□□□□ 0.36
ERBB2-214ENST00000583038 CYFIP1Q7L576 1253 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms