RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 CSPG5O95196 566 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 KRT18P05783 430 aaKnown RBP15.32■□□□□ 0.04
GGA3-215ENST00000582821 CTSAP10619 480 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 MCF2P10911 925 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 GRM5P41594 1212 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 GTF2BQ00403 316 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 TUSC3Q13454 348 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 KCNC3Q14003 757 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 XKR4Q5GH76 650 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 MPZL3Q6UWV2 235 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 TMEM184AQ6ZMB5 413 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 RPS6KC1Q96S38 1066 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 VN1R3Q9BXE9 311 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 CDT1Q9H211 546 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 TCHHQ07283 1943 aa15.32■□□□□ 0.04
GGA3-215ENST00000582821 MUC3AQ02505 3323 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 GRXCR2A6NFK2 248 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 C2orf71A6NGG8 1288 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 MYMKA6NI61 221 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 HIDE1A8MVS5 230 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 PTGESO14684 152 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 PER2O15055 1255 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 TBCAO75347 108 aaKnown RBP15.31■□□□□ 0.04
GGA3-215ENST00000582821 CXCL14O95715 111 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 PIGRP01833 764 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 THP07101 528 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 OR1G1P47890 313 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 DLX2Q07687 328 aaPredicted RBP15.31■□□□□ 0.04
GGA3-215ENST00000582821 BECN1Q14457 450 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 NAB2Q15742 525 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 PLPP4Q5VZY2 271 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 SHC4Q6S5L8 630 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 ALKAL1Q6UXT8 129 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 RBM23Q86U06 439 aaKnown RBP15.31■□□□□ 0.04
GGA3-215ENST00000582821 RNF168Q8IYW5 571 aaPredicted RBP15.31■□□□□ 0.04
GGA3-215ENST00000582821 DDX12PQ92771 950 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 DNAJC19Q96DA6 116 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 MSLNLQ96KJ4 702 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 TCHPQ9BT92 498 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
GGA3-215ENST00000582821 COLEC11Q9BWP8 271 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 PANK2Q9BZ23 570 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 MARCH5Q9NX47 278 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 CLEC1BQ9P126 229 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 TBX20Q9UMR3 447 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 GDAQ9Y2T3 454 aa15.31■□□□□ 0.04
GGA3-215ENST00000582821 H3BQ06 376 aaPredicted RBP15.3■□□□□ 0.04
GGA3-215ENST00000582821 LINC01565O15544 149 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 LILRB3O75022 631 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 TBX10O75333 385 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 GLP2RO95838 553 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 STAT6P42226 847 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 DNM1Q05193 864 aaKnown RBP15.3■□□□□ 0.04
GGA3-215ENST00000582821 MCL1Q07820 350 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 COASYQ13057 564 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 E2F4Q16254 413 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 FOXD4L6Q3SYB3 417 aaPredicted RBP15.3■□□□□ 0.04
GGA3-215ENST00000582821 FOXD4L3Q6VB84 417 aaPredicted RBP15.3■□□□□ 0.04
GGA3-215ENST00000582821 ZNF720Q7Z2F6 126 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 FAM178BQ8IXR5 827 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 GPR65Q8IYL9 337 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 ADAMTS19Q8TE59 1207 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
GGA3-215ENST00000582821 ACAP3Q96P50 834 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 CXCL16Q9H2A7 254 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 CUEDC2Q9H467 287 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 TOPORSQ9NS56 1045 aaPredicted RBP15.3■□□□□ 0.04
GGA3-215ENST00000582821 SEL1LQ9UBV2 794 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 PCDHA7Q9UN72 937 aa15.3■□□□□ 0.04
GGA3-215ENST00000582821 FRMD3A2A2Y4 597 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 CLDN3O15551 220 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 SOD2P04179 222 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 GAP43P17677 238 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 YARSP54577 528 aaKnown RBP15.29■□□□□ 0.04
GGA3-215ENST00000582821 PTCRAQ6ISU1 281 aaPredicted RBP15.29■□□□□ 0.04
GGA3-215ENST00000582821 EP400NLQ6ZTU2 488 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 DYMQ7RTS9 669 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 ZBTB33Q86T24 672 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 PDILTQ8N807 584 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 CEP120Q8N960 986 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 IQUBQ8NA54 791 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 PPP1R10Q96QC0 940 aaKnown RBP15.29■□□□□ 0.04
GGA3-215ENST00000582821 HERC2P3Q9BVR0 1158 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 LRRC27Q9C0I9 530 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 KBTBD4Q9NVX7 518 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 FAM50BQ9Y247 325 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 SSX2IPQ9Y2D8 614 aa15.29■□□□□ 0.04
GGA3-215ENST00000582821 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
GGA3-215ENST00000582821 C5orf42Q9H799 3197 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 SMIM28A0A1B0GU29 152 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 K7ENM7 598 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 CLASP2O75122 1294 aaKnown RBP15.28■□□□□ 0.04
GGA3-215ENST00000582821 KCNE1P15382 129 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 NMT1P30419 496 aaKnown RBP15.28■□□□□ 0.04
GGA3-215ENST00000582821 ME1P48163 572 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 NDUFV1P49821 464 aa15.28■□□□□ 0.04
GGA3-215ENST00000582821 NOLC1Q14978 699 aaKnown RBP eCLIP15.28■□□□□ 0.04
GGA3-215ENST00000582821 PTPN14Q15678 1187 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms