RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 EMID1Q96A84 441 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 SGIP1Q9BQI5 828 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 COQ4Q9Y3A0 265 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 F8VZ95 297 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 PPP1R37O75864 691 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 CCDC127Q96BQ5 260 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 DHX33Q9H6R0 707 aaKnown RBP10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 ARHGAP28Q9P2N2 729 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 PCDHAC2Q9Y5I4 1007 aa10.86□□□□□ -0.67
TRAPPC8-211ENST00000582539 NPHP3-ACAD11A0A0J9YXS1 232 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 STK10O94804 968 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 DLATP10515 647 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PMS1P54277 932 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 FCGRTP55899 365 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 MRPS9P82933 396 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 IFFO1Q0D2I5 559 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 TAF2Q6P1X5 1199 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ARMCX2Q7L311 632 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ACTRT1Q8TDG2 376 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 BAP1Q92560 729 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 SYT17Q9BSW7 474 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 NAGPAQ9UK23 515 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PCDHGC5Q9Y5F6 944 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 KRIT1O00522 736 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 EVI5O60447 810 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PAEPP09466 180 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 COPS2P61201 443 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 MTA1Q13330 715 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 LONRF2Q1L5Z9 754 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ATF7IP2Q5U623 682 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PURBQ96QR8 312 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF408Q9H9D4 720 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 UBN1Q9NPG3 1134 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 PARVAQ9NVD7 372 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 KCNK3O14649 394 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 RNF8O76064 485 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ECM2O94769 699 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 UBA1P22314 1058 aaKnown RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF771Q7L3S4 317 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 GABPB2Q8TAK5 448 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 STIM2Q9P246 746 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 ITGA11Q9UKX5 1188 aa10.85□□□□□ -0.67
TRAPPC8-211ENST00000582539 DHX15O43143 795 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 KRT7P08729 469 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ARL2P36404 184 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PRMT2P55345 433 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF699Q32M78 642 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 LDLRAD1Q5T700 205 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 FAM213AQ9BRX8 229 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 AGPAT5Q9NUQ2 364 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ANKFY1Q9P2R3 1169 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PHIPQ8WWQ0 1821 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 OPLAHO14841 1288 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PSMC6P62333 389 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 FAM187BQ17R55 369 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PARD3BQ8TEW8 1205 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 FBXL18Q96ME1 805 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 NSRP1Q9H0G5 558 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ACADSBP45954 432 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 RAB27AP51159 221 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF135P52742 658 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ILF2Q12905 390 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 SMC1AQ14683 1233 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 RRP1BQ14684 758 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ZNF572Q7Z3I7 529 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PCGF5Q86SE9 256 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 SPATA18Q8TC71 538 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 FRMD8Q9BZ67 464 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PCIF1Q9H4Z3 704 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 TTC7AQ9ULT0 858 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 FHOD1Q9Y613 1164 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 RBBP6Q7Z6E9 1792 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PSTPIP1O43586 416 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 GNRH1P01148 92 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 GCLMP48507 274 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 CENPCQ03188 943 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PIGHQ14442 188 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 DNAJC24Q6P3W2 148 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 NOTUMQ6P988 496 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 NLRP7Q8WX94 980 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 P3H4Q92791 437 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 PGBD4Q96DM1 585 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 ACAP3Q96P50 834 aa10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 DDX41Q9UJV9 622 aaKnown RBP10.84□□□□□ -0.67
TRAPPC8-211ENST00000582539 STYXL1Q9Y6J8 313 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms