RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 STAT5BP51692 787 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 POLGP54098 1239 aaPredicted RBP9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 NFKBIBQ15653 356 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 ZRSR1Q15695 479 aaKnown RBP9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 IL17AQ16552 155 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 XKR3Q5GH77 459 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 POTEGQ6S5H5 508 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 ABHD15Q6UXT9 468 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 CATSPER3Q86XQ3 398 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 FMR1NBQ8N0W7 255 aaPredicted RBP9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 CNNM3Q8NE01 707 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 NETO1Q8TDF5 533 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 STAMQ92783 540 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 EIF2AK1Q9BQI3 630 aaKnown RBP9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 UNC45AQ9H3U1 944 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 ZNF302Q9NR11 478 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 ST3GAL5Q9UNP4 418 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 GINS2Q9Y248 185 aa9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 MAFBQ9Y5Q3 323 aaPredicted RBP9.65□□□□□ -0.86
PDLIM1P3-201ENST00000582370 COL1A2P08123 1366 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PHLPP2Q6ZVD8 1323 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SLC30A4O14863 429 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 BACH1O14867 736 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 POLR2DO15514 142 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LAMTOR5O43504 91 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TBC1D4O60343 1298 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SLITRK3O94933 977 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SMC2O95347 1197 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CAVIN2O95810 425 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PPP1R2P41236 205 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MAGEA9P43362 315 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ALDH7A1P49419 539 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CDC42EP1Q00587 391 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DSC3Q14574 896 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PLCB4Q15147 1175 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CNNM4Q6P4Q7 775 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 DCLRE1AQ6PJP8 1040 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MTHFD1LQ6UB35 978 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FAM228AQ86W67 206 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 VPS52Q8N1B4 723 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SLC44A3Q8N4M1 653 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ZBTB44Q8NCP5 570 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ENGASEQ8NFI3 743 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CMASQ8NFW8 434 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GPR152Q8TDT2 470 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TRAPPC12Q8WVT3 735 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TMEM40Q8WWA1 233 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ATRIPQ8WXE1 791 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RSPH1Q8WYR4 309 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LARP4BQ92615 738 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CLIC6Q96NY7 704 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LXNQ9BS40 222 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MRPL9Q9BYD2 267 aaKnown RBP9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RHOBTB2Q9BYZ6 727 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 C17orf75Q9HAS0 396 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RNF19AQ9NV58 838 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RMND1Q9NWS8 449 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 EPS15L1Q9UBC2 864 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GMEB2Q9UKD1 530 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ANGPTL2Q9UKU9 493 aa9.64□□□□□ -0.87
PDLIM1P3-201ENST00000582370 ARID2Q68CP9 1835 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CEP295Q9C0D2 2601 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SPEGQ15772 3267 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 A0A1B0GVL5 298 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CHMP2AO43633 222 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TRAK2O60296 914 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 HBP1O60381 514 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 LILRB5O75023 590 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 N4BP1O75113 896 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GLULP15104 373 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TGM1P22735 817 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 YWHABP31946 246 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RFC5P40937 340 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 NDUFA8P51970 172 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CRYBB1P53674 252 aaPredicted RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 BCAR1P56945 870 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 STARD6P59095 220 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SNW1Q13573 536 aaKnown RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TMEM119Q4V9L6 283 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CT47A1Q5JQC4 288 aaPredicted RBP9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CCDC183Q5T5S1 534 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 PDXDC2PQ6P474 469 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 KRBA2Q6ZNG9 492 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TPH2Q8IWU9 490 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 CKAP2LQ8IYA6 745 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 TRIML1Q8N9V2 468 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 MCPH1Q8NEM0 835 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 FEZF2Q8TBJ5 459 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 RSAD2Q8WXG1 361 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 COL26A1Q96A83 441 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 SHDQ96IW2 340 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 EPSTI1Q96J88 318 aa9.63□□□□□ -0.87
PDLIM1P3-201ENST00000582370 GSDMAQ96QA5 445 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms