RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 F13A1P00488 732 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 GRIK3Q13003 919 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 SMC1AQ14683 1233 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 SMAD2Q15796 467 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CLUL1Q15846 466 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CEP120Q8N960 986 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 KRI1Q8N9T8 703 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 ZBTB45Q96K62 511 aaPredicted RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 FAM193BQ96PV7 902 aaPredicted RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 PAAF1Q9BRP4 392 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 ADPGKQ9BRR6 497 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 MRPL4Q9BYD3 311 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 HAPLN2Q9GZV7 340 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CDT1Q9H211 546 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 S1PR5Q9H228 398 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CACNG4Q9UBN1 327 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 KCNG1Q9UIX4 513 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CD207Q9UJ71 328 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 PPP6R2O75170 966 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 SOD2P04179 222 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 GRM5P41594 1212 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 OR1G1P47890 313 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 NDUFV1P49821 464 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 SMTNP53814 917 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 SYCE2Q6PIF2 218 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 HAUS6Q7Z4H7 955 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 DNAJC19Q96DA6 116 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 PPP1R10Q96QC0 940 aaKnown RBP13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 STK17AQ9UEE5 414 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 GDAQ9Y2T3 454 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 PRG3Q9Y2Y8 225 aaPredicted RBP13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 ZDHHC9Q9Y397 364 aa13.6□□□□□ -0.23
SMARCD2-209ENST00000581832 MYO10Q9HD67 2058 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 MYMKA6NI61 221 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 SPTLC2O15270 562 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 YEATS4O95619 227 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 PIGRP01833 764 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 THP07101 528 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 MCF2P10911 925 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 TUSC3Q13454 348 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 AXDND1Q5T1B0 1012 aaPredicted RBP13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 ANKRD54Q6NXT1 300 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 CD300LGQ6UXG3 332 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 ZPBP2Q6X784 338 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 SLC22A17Q8WUG5 538 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 FOXD4L4Q8WXT5 416 aaPredicted RBP13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 SUSD6Q92537 303 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 PARVGQ9HBI0 331 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 HCFC2Q9Y5Z7 792 aa13.59□□□□□ -0.23
SMARCD2-209ENST00000581832 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 TRAK2O60296 914 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 FAM189A1O60320 539 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 TOM1L1O75674 476 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 GTF2BQ00403 316 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ZP2Q05996 745 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 MCL1Q07820 350 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 STK38Q15208 465 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 E2F4Q16254 413 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ZNF568Q3ZCX4 644 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 RRAGBQ5VZM2 374 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 MYCT1Q8N699 235 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 DDX12PQ92771 950 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ZNF396Q96N95 335 aaPredicted RBP13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ZMAT2Q96NC0 199 aaKnown RBP13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 KLHL5Q96PQ7 755 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 RPS6KC1Q96S38 1066 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 COLEC11Q9BWP8 271 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 STRA6Q9BX79 667 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 PANK2Q9BZ23 570 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 PRKAG3Q9UGI9 489 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 ADAM28Q9UKQ2 775 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 PLXNA3P51805 1871 aa13.58□□□□□ -0.24
SMARCD2-209ENST00000581832 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
SMARCD2-209ENST00000581832 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
SMARCD2-209ENST00000581832 PPP1R37O75864 691 aa13.57□□□□□ -0.24
SMARCD2-209ENST00000581832 FAM13AO94988 1023 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms