RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 WNT8AQ9H1J5 351 aa18.19■□□□□ 0.5
CDK5RAP3-215ENST00000579780 RBAKQ9NYW8 714 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CLTAP09496 248 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ACOT2P49753 483 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 RAB27AP51159 221 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 VAMP7P51809 220 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ZNF75DP51815 510 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 DSC3Q14574 896 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 PSMD6Q15008 389 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 UBXN11Q5T124 520 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CEP120Q8N960 986 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TRIM6Q9C030 488 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 NDST4Q9H3R1 872 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TMEM39AQ9NV64 488 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 INTS13Q9NVM9 706 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 SCN5AQ14524 2016 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 UMODL1Q5DID0 1318 aa18.18■□□□□ 0.5
CDK5RAP3-215ENST00000579780 KIAA0355O15063 1070 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 NBNO60934 754 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 AFPP02771 609 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CXCL10P02778 98 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CDC25BP30305 580 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 RFC2P35250 354 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TNFSF9P41273 254 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 SURF1Q15526 300 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TCERG1LQ5VWI1 586 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 PLEKHO2Q8TD55 490 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 PARD3BQ8TEW8 1205 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 APBB2Q92870 758 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CCDC94Q9BW85 323 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 FTHL17Q9BXU8 183 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 EIF2AQ9BY44 585 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 OSBPL7Q9BZF2 842 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 PPP1R12CQ9BZL4 782 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 VPS16Q9H269 839 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TMX1Q9H3N1 280 aa18.17■□□□□ 0.5
CDK5RAP3-215ENST00000579780 STX10O60499 249 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 N4BP1O75113 896 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 IL18RAPO95256 599 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ADCY5O95622 1261 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TRIM49P0CI25 452 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 TRIM49CP0CI26 452 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 STAG3L1P0CL83 205 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CLDN10P78369 228 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 NR1I3Q14994 352 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ENOX2Q16206 610 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 PLEKHG4Q58EX7 1191 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 FKBP15Q5T1M5 1219 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 HACE1Q8IYU2 909 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CGRRF1Q99675 332 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 RPF1Q9H9Y2 349 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 FAM105AQ9NUU6 356 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 LTBP2Q14767 1821 aa18.16■□□□□ 0.5
CDK5RAP3-215ENST00000579780 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 LRRIQ3A6PVS8 624 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 CXCL8P10145 99 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 GTF2H1P32780 548 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 KCNH2Q12809 1159 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 GPNMBQ14956 572 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 SEZ6Q53EL9 994 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 C1orf220Q5T0J3 134 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 SEPT8Q92599 483 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 ACAP3Q96P50 834 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 FNBP1Q96RU3 617 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 NXF3Q9H4D5 531 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 IPPQ9Y573 584 aa18.15■□□□□ 0.5
CDK5RAP3-215ENST00000579780 A0A1W2PQC6 194 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 GTPBP10A4D1E9 387 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 PES1O00541 588 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 PMM2O15305 246 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 P4HA2O15460 535 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 MGEA5O60502 916 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 RECQL4O94761 1208 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 SKIP12755 728 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 CYP2C18P33260 490 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 PBX1P40424 430 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 FMO5P49326 533 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 AP3M2P53677 418 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 UBXN1Q04323 297 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 WDR49Q8IV35 697 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 CD302Q8IX05 232 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 SMG8Q8ND04 991 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 CCDC127Q96BQ5 260 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 ABHD8Q96I13 439 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 SNX27Q96L92 541 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 ASB7Q9H672 318 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 TOPORSQ9NS56 1045 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 C1orf112Q9NSG2 853 aa18.14■□□□□ 0.49
CDK5RAP3-215ENST00000579780 PCDHB2Q9Y5E7 798 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms