RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
TSEN54-206ENST00000579449 PLEKHO2Q8TD55 490 aa15.09■□□□□ 0.01
TSEN54-206ENST00000579449 EIF2AQ9BY44 585 aaKnown RBP15.09■□□□□ 0.01
TSEN54-206ENST00000579449 NDST4Q9H3R1 872 aa15.09■□□□□ 0.01
TSEN54-206ENST00000579449 CPSF3Q9UKF6 684 aaKnown RBP15.09■□□□□ 0.01
TSEN54-206ENST00000579449 PADI3Q9ULW8 664 aa15.09■□□□□ 0.01
TSEN54-206ENST00000579449 SCN5AQ14524 2016 aa15.09■□□□□ 0.01
TSEN54-206ENST00000579449 TANC1Q9C0D5 1861 aa15.08■□□□□ 0.01
TSEN54-206ENST00000579449 TULP1O00294 542 aaPredicted RBP15.08■□□□□ 0
TSEN54-206ENST00000579449 PITPNM1O00562 1244 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 TRIM49P0CI25 452 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 TRIM49CP0CI26 452 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 CDC25BP30305 580 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 MCCD1P59942 119 aaPredicted RBP15.08■□□□□ 0
TSEN54-206ENST00000579449 OSTNP61366 133 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 DLG4P78352 724 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 UBXN1Q04323 297 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 PAK2Q13177 524 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 MBTPS1Q14703 1052 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 PTPN21Q16825 1174 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 BRSK2Q8IWQ3 736 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 TMEM192Q8IY95 271 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 TMC2Q8TDI7 906 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 PARD3BQ8TEW8 1205 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 SLC35C1Q96A29 364 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 CCDC51Q96ER9 411 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 RBAKQ9NYW8 714 aaPredicted RBP15.08■□□□□ 0
TSEN54-206ENST00000579449 UMODL1Q5DID0 1318 aa15.08■□□□□ 0
TSEN54-206ENST00000579449 AFPP02771 609 aaKnown RBP15.07■□□□□ 0
TSEN54-206ENST00000579449 CLTAP09496 248 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 STAG3L1P0CL83 205 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 WNT7BP56706 349 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 ENPEPQ07075 957 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 PSMD6Q15008 389 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 KYAT1Q16773 422 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 C1orf220Q5T0J3 134 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 UBXN11Q5T124 520 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 FKBP15Q5T1M5 1219 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 TWF2Q6IBS0 349 aaKnown RBP15.07■□□□□ 0
TSEN54-206ENST00000579449 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.07■□□□□ 0
TSEN54-206ENST00000579449 UBE2Q1Q7Z7E8 422 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 CCDC127Q96BQ5 260 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 HIPK3Q9H422 1215 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 RPF1Q9H9Y2 349 aaKnown RBP15.07■□□□□ 0
TSEN54-206ENST00000579449 CHST12Q9NRB3 414 aa15.07■□□□□ 0
TSEN54-206ENST00000579449 RALGAPA2Q2PPJ7 1873 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 LRRIQ3A6PVS8 624 aaPredicted RBP15.06■□□□□ 0
TSEN54-206ENST00000579449 CLTBP09497 229 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 PBX1P40424 430 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 GRM5P41594 1212 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 DSC3Q14574 896 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 ENOX2Q16206 610 aaKnown RBP15.06■□□□□ 0
TSEN54-206ENST00000579449 VSTM4Q8IW00 320 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 TET1Q8NFU7 2136 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 FAM212AQ96EL1 285 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 POP1Q99575 1024 aaKnown RBP15.06■□□□□ 0
TSEN54-206ENST00000579449 PPP1R12CQ9BZL4 782 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 TRIM6Q9C030 488 aaPredicted RBP15.06■□□□□ 0
TSEN54-206ENST00000579449 TMX1Q9H3N1 280 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 MMRN2Q9H8L6 949 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 PDE11AQ9HCR9 933 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 TMEM39AQ9NV64 488 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 TBX21Q9UL17 535 aa15.06■□□□□ 0
TSEN54-206ENST00000579449 ALPK3Q96L96 1907 aa15.05■□□□□ 0
TSEN54-206ENST00000579449 MGEA5O60502 916 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 NBNO60934 754 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 CXCL8P10145 99 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 DLATP10515 647 aaKnown RBP15.05■□□□□ -0
TSEN54-206ENST00000579449 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
TSEN54-206ENST00000579449 CYP2C18P33260 490 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 FMO5P49326 533 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 CCL23P55773 120 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 POU5F1Q01860 360 aaKnown RBP15.05■□□□□ -0
TSEN54-206ENST00000579449 PPP3CAQ08209 521 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 GPNMBQ14956 572 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 TMC6Q7Z403 805 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 USP37Q86T82 979 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 DRC7Q8IY82 874 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 SPC24Q8NBT2 197 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 PDLIM2Q96JY6 352 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 ACAP3Q96P50 834 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 ERGIC2Q96RQ1 377 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 FNBP1Q96RU3 617 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 CCDC94Q9BW85 323 aaPredicted RBP15.05■□□□□ -0
TSEN54-206ENST00000579449 WNT8AQ9H1J5 351 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 NXF3Q9H4D5 531 aaKnown RBP15.05■□□□□ -0
TSEN54-206ENST00000579449 TOPORSQ9NS56 1045 aaPredicted RBP15.05■□□□□ -0
TSEN54-206ENST00000579449 SNTG2Q9NY99 539 aa15.05■□□□□ -0
TSEN54-206ENST00000579449 PDCD11Q14690 1871 aaKnown RBP15.04■□□□□ -0
TSEN54-206ENST00000579449 A0A1W2PQC6 194 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 LACTBL1A8MY62 500 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 MEFVO15553 781 aaPredicted RBP15.04■□□□□ -0
TSEN54-206ENST00000579449 STX10O60499 249 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 IL18RAPO95256 599 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 GCLMP48507 274 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 SYCP1Q15431 976 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 SURF1Q15526 300 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 SLC10A6Q3KNW5 377 aa15.04■□□□□ -0
TSEN54-206ENST00000579449 CBWD6Q4V339 395 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms