RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 NHEJ1Q9H9Q4 299 aaPredicted RBP24.81■■□□□ 1.56
LIMD2-205ENST00000578402 HDAC6Q9UBN7 1215 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 SSU72P8A0A1W2PR75 194 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 KIF2AO00139 706 aaPredicted RBP24.81■■□□□ 1.56
LIMD2-205ENST00000578402 TUBB4AP04350 444 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 MAPK8IP2Q13387 824 aaPredicted RBP24.81■■□□□ 1.56
LIMD2-205ENST00000578402 SURF1Q15526 300 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 ZNF568Q3ZCX4 644 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 SLC9C1Q4G0N8 1177 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 REXO1L1PQ8IX06 675 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 NME8Q8N427 588 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 SLAIN1Q8ND83 568 aa24.81■■□□□ 1.56
LIMD2-205ENST00000578402 GCOM2Q9BZD3 368 aaPredicted RBP24.81■■□□□ 1.56
LIMD2-205ENST00000578402 B4GALT5O43286 388 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 GPR32O75388 356 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 SERPING1P05155 500 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 DLATP10515 647 aaKnown RBP24.8■■□□□ 1.56
LIMD2-205ENST00000578402 AP3M2P53677 418 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 RAPGEF1Q13905 1077 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 HIC1Q14526 733 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 TMEM132AQ24JP5 1023 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 IQCEQ6IPM2 695 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 TAF2Q6P1X5 1199 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 C15orf39Q6ZRI6 1047 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 FBXL13Q8NEE6 735 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 ZNF296Q8WUU4 475 aaPredicted RBP24.8■■□□□ 1.56
LIMD2-205ENST00000578402 CGRRF1Q99675 332 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 STK33Q9BYT3 514 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 FAM49AQ9H0Q0 323 aaPredicted RBP24.8■■□□□ 1.56
LIMD2-205ENST00000578402 ARHGAP20Q9P2F6 1191 aa24.8■■□□□ 1.56
LIMD2-205ENST00000578402 CPSF3Q9UKF6 684 aaKnown RBP24.8■■□□□ 1.56
LIMD2-205ENST00000578402 EIF3CLB5ME19 914 aaKnown RBP24.79■■□□□ 1.56
LIMD2-205ENST00000578402 TREHO43280 583 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 MCF2P10911 925 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 KYAT1Q16773 422 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 HGSNATQ68CP4 663 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 RUFY4Q6ZNE9 571 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 SV2AQ7L0J3 742 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 ZBTB33Q86T24 672 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 PCSK9Q8NBP7 692 aaKnown RBP24.79■■□□□ 1.56
LIMD2-205ENST00000578402 CCDC42Q96M95 316 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 POP1Q99575 1024 aaKnown RBP24.79■■□□□ 1.56
LIMD2-205ENST00000578402 EIF3CQ99613 913 aaKnown RBP24.79■■□□□ 1.56
LIMD2-205ENST00000578402 DESI2Q9BSY9 194 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 CDT1Q9H211 546 aa24.79■■□□□ 1.56
LIMD2-205ENST00000578402 DDX20Q9UHI6 824 aaKnown RBP24.79■■□□□ 1.56
LIMD2-205ENST00000578402 BZW2Q9Y6E2 419 aaKnown RBP24.79■■□□□ 1.56
LIMD2-205ENST00000578402 ZC3H11AO75152 810 aaKnown RBP eCLIP24.78■■□□□ 1.56
LIMD2-205ENST00000578402 OFD1O75665 1012 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 ERLIN2O94905 339 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 RPLP2P05387 115 aaKnown RBP24.78■■□□□ 1.56
LIMD2-205ENST00000578402 HARSP12081 509 aaKnown RBP24.78■■□□□ 1.56
LIMD2-205ENST00000578402 KRT83P78385 493 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 MAP2K1Q02750 393 aaPredicted RBP24.78■■□□□ 1.56
LIMD2-205ENST00000578402 PTPN14Q15678 1187 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 ASIC2Q16515 512 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 ZBTB41Q5SVQ8 909 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 CCSAPQ6IQ19 270 aaPredicted RBP24.78■■□□□ 1.56
LIMD2-205ENST00000578402 CXCL17Q6UXB2 119 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.78■■□□□ 1.56
LIMD2-205ENST00000578402 SESTD1Q86VW0 696 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 PPP1R16BQ96T49 567 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 GTF2IRD1Q9UHL9 959 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 DNAJC12Q9UKB3 198 aa24.78■■□□□ 1.56
LIMD2-205ENST00000578402 TSPAN1O60635 241 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 IPO7O95373 1038 aaKnown RBP24.77■■□□□ 1.56
LIMD2-205ENST00000578402 PRKCIP41743 596 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 KIZQ2M2Z5 673 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 ZACNQ401N2 412 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 EEF1DP3Q658K8 133 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 C16orf45Q96MC5 204 aaPredicted RBP24.77■■□□□ 1.56
LIMD2-205ENST00000578402 PDZD7Q9H5P4 517 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 PDE11AQ9HCR9 933 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 TOPORSQ9NS56 1045 aaPredicted RBP24.77■■□□□ 1.56
LIMD2-205ENST00000578402 RAB20Q9NX57 234 aa24.77■■□□□ 1.56
LIMD2-205ENST00000578402 LCA5LO95447 670 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 ARF4P18085 180 aaPredicted RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 TNNI1P19237 187 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 ANXA13P27216 316 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 STAT1P42224 750 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 NBPF20Q3BBV1 942 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 PHLDB3Q6NSJ2 640 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 WDR49Q8IV35 697 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 DNAJB3Q8WWF6 145 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 FAM81BQ96LP2 452 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 AJAP1Q9UKB5 411 aaPredicted RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 A0A1B0GUA9 196 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 F8VZ95 297 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 CABYRO75952 493 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 C4BPAP04003 597 aaKnown RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 ASGR1P07306 291 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 DARSP14868 501 aaKnown RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 FERP16591 822 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 NCBP1Q09161 790 aaKnown RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 DNTTIP2Q5QJE6 756 aaKnown RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 IRF2BP2Q7Z5L9 587 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 APBB1IPQ7Z5R6 666 aaPredicted RBP24.76■■□□□ 1.55
LIMD2-205ENST00000578402 RNF180Q86T96 592 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 ACRBPQ8NEB7 543 aa24.76■■□□□ 1.55
LIMD2-205ENST00000578402 TAS1R2Q8TE23 839 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms