RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 POU5F1Q01860 360 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LRRC63Q05C16 580 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 KCNA1Q09470 495 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GPNMBQ14956 572 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 COL19A1Q14993 1142 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FBXO47Q5MNV8 452 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ISM2Q6H9L7 571 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SPRED2Q7Z698 418 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FBXL6Q8N531 539 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ENOX1Q8TC92 643 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TMEM40Q8WWA1 233 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NLRP7Q8WX94 980 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ATOH1Q92858 354 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NLRP4Q96MN2 994 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ACO2Q99798 780 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CHST12Q9NRB3 414 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 DMAC2Q9NW81 257 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SIP14410 1827 aa12.2□□□□□ -0.46
CDK5RAP3-204ENST00000577664 VPS13AQ96RL7 3174 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TMEM221A6NGB7 291 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 M0R296 226 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ABLIM1O14639 778 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 IKBKBO14920 756 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 KIAA0391O15091 583 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GPR182O15218 404 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CXCL10P02778 98 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GARTP22102 1010 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NUBP1P53384 320 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 STRN3Q13033 797 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TRIM67Q6ZTA4 783 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 HERC6Q8IVU3 1022 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SUGP1Q8IWZ8 645 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SMYD4Q8IYR2 804 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GDPD5Q8WTR4 605 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 P2RX5Q93086 422 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 COL26A1Q96A83 441 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 OSMRQ99650 979 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MRPL4Q9BYD3 311 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NAT10Q9H0A0 1025 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GBP3Q9H0R5 595 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TYW1Q9NV66 732 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MUTYHQ9UIF7 546 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TNFSF13BQ9Y275 285 aa12.19□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ZMYM2Q9UBW7 1377 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CNTNAP2Q9UHC6 1331 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 A0A0B4J269 797 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 BICDL2A1A5D9 508 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 INO80B-WBP1J3KQ70 363 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TSPAN1O60635 241 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TOM1L1O75674 476 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 EDN1P05305 212 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PRKCBP05771 671 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ADSSP30520 456 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 RFC2P35250 354 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NBL1P41271 181 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 TMEM62Q0P6H9 643 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PAK1Q13153 545 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LPIN1Q14693 890 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 IQCB1Q15051 598 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ANKRD40Q6AI12 368 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 SLC39A4Q6P5W5 647 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 LRRC8DQ7L1W4 858 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FAM228AQ86W67 206 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CCDC51Q96ER9 411 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CNTNAP3BQ96NU0 1288 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ERVK-5Q9HDB9 667 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 AGPAT5Q9NUQ2 364 aa12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NOC2LQ9Y3T9 749 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MAPK13O15264 365 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 CALUO43852 315 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ARF4P18085 180 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ZNF165P49910 485 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PMS1P54277 932 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ENPEPQ07075 957 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 MCL1Q07820 350 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NCBP1Q09161 790 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PRPF4BQ13523 1007 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 DSC3Q14574 896 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NCAPHQ15003 741 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 ANO6Q4KMQ2 910 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 C11orf57Q6ZUT1 292 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 NELFBQ8WX92 580 aa12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 DUSP9Q99956 384 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 GZF1Q9H116 711 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-204ENST00000577664 DNAJC25Q9H1X3 360 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms