RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 PNOCQ13519 176 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 FAM98CQ17RN3 349 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 SV2CQ496J9 727 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TAF1BQ53T94 588 aaPredicted RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 CAPSLQ8WWF8 208 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 LSM14BQ9BX40 385 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 RBM7Q9Y580 266 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 SESN1Q9Y6P5 492 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 KBTBD13C9JR72 458 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 MED7O43513 233 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TSC22D2O75157 780 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 SMNDC1O75940 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDH8-203ENST00000577390 CNGA2Q16280 664 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 UHMK1Q8TAS1 419 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 RMDN1Q96DB5 314 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 NUDT14O95848 222 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 PMS2P54278 862 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 PEX5LQ8IYB4 626 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 NDNQ99608 321 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TIMMDC1Q9NPL8 285 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 MAFFQ9ULX9 164 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 SPACA6W5XKT8 324 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 HMGXB3Q12766 1538 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 OPLAHO14841 1288 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 VHLP40337 213 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 IL9RQ01113 521 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 LPIN1Q14693 890 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 FAAH2Q6GMR7 532 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 HIPK4Q8NE63 616 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 SKA1Q96BD8 255 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 VTI1BQ9UEU0 232 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 ABCC4O15439 1325 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 MFAP3LO75121 409 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 LCA5LO95447 670 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 MAPRE1Q15691 268 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 BBS9Q3SYG4 887 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 MRPL50Q8N5N7 158 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 RUNDC3BQ96NL0 473 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 SAE1Q9UBE0 346 aaPredicted RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 TJP2Q9UDY2 1190 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 PSMA4P25789 261 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 PTK2Q05397 1052 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 MMRN1Q13201 1228 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 ARHGEF7Q14155 803 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 CCDC3Q9BQI4 270 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 RAB14P61106 215 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TBC1D25Q3MII6 688 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 SHQ1Q6PI26 577 aaKnown RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 TTLL11Q8NHH1 800 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 FAM129BQ96TA1 746 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TRIM62Q9BVG3 475 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 IQCMA0A1B0GVH7 501 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 PEX14O75381 377 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 SPAG7O75391 227 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 IFNAR2P48551 515 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 CACNB2Q08289 660 aaPredicted RBP9.32□□□□□ -0.92
CDH8-203ENST00000577390 CBX3Q13185 183 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 TTC8Q8TAM2 541 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 EPB41L5Q9HCM4 733 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 NLRC4Q9NPP4 1024 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 KRT84Q9NSB2 600 aa9.32□□□□□ -0.92
CDH8-203ENST00000577390 GOLGA8TH3BQL2 631 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 GOLGA8HP0CJ92 632 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAPKAPK2P49137 400 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 SCARA5Q6ZMJ2 495 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 UXS1Q8NBZ7 420 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 PCDHA7Q9UN72 937 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MYO5BQ9ULV0 1848 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ZBTB7BO15156 539 aaPredicted RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAPK13O15264 365 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 BRAFP15056 766 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAGOHP61326 146 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 IYDQ6PHW0 289 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 CCDC149Q6ZUS6 474 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 GPBP1Q86WP2 473 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 CHSY1Q86X52 802 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MAGOHBQ96A72 148 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 ELMO2Q96JJ3 720 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 RPS6KB2Q9UBS0 482 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MRPL11Q9Y3B7 192 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 TMEM191CA6NGB0 347 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 C16orf96A6NNT2 1141 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 TFRCP02786 760 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 RALBP11234 206 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 PFKFB1P16118 471 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 METTL21CQ5VZV1 264 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 FAM47EQ6ZV65 393 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 MARK2Q7KZI7 788 aaKnown RBP9.31□□□□□ -0.92
CDH8-203ENST00000577390 RRAGAQ7L523 313 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 DDIASQ8IXT1 998 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 ZFAND2BQ8WV99 257 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 TUBGCP3Q96CW5 907 aa9.31□□□□□ -0.92
CDH8-203ENST00000577390 FAM207AQ9NSI2 230 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms