RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SREBF1P36956 1147 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 STAT5BP51692 787 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 PTPROQ16827 1216 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 LEXMQ3ZCV2 418 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 PAN2Q504Q3 1202 aaKnown RBP7.07□□□□□ -1.28
NUP88-212ENST00000576708 CEP55Q53EZ4 464 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 HGSNATQ68CP4 663 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 TSHZ1Q6ZSZ6 1077 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 Q6ZUG5 572 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 TRMT1LQ7Z2T5 733 aaKnown RBP7.07□□□□□ -1.28
NUP88-212ENST00000576708 RSPH3Q86UC2 560 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 PLA2G4DQ86XP0 818 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 RASGRP4Q8TDF6 673 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 BRF1Q92994 677 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 JAKMIP1Q96N16 626 aaKnown RBP7.07□□□□□ -1.28
NUP88-212ENST00000576708 SAMD11Q96NU1 681 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 PPP1R16BQ96T49 567 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 SDF4Q9BRK5 362 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 AZI2Q9H6S1 392 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 BARHL2Q9NY43 387 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 PPME1Q9Y570 386 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 PCDHA2Q9Y5H9 948 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 TRPV2Q9Y5S1 764 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 SNX14Q9Y5W7 946 aa7.07□□□□□ -1.28
NUP88-212ENST00000576708 MRPL42Q9Y6G3 142 aaKnown RBP7.07□□□□□ -1.28
NUP88-212ENST00000576708 ADGRA3Q8IWK6 1321 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 IGLV3-22A0A075B6J6 115 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 LINC01565O15544 149 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 DHX15O43143 795 aaKnown RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 MGEA5O60502 916 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 DGKIO75912 1065 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 FOSP01100 380 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 ZNF16P17020 682 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 DNAJB1P25685 340 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 KLRC1P26715 233 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 COL8A1P27658 744 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 GNA15P30679 374 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 BMPR1AP36894 532 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 LTBRP36941 435 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 METAP2P50579 478 aaKnown RBP eCLIP7.06□□□□□ -1.28
NUP88-212ENST00000576708 FGD1P98174 961 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 DLX2Q07687 328 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 PSMD2Q13200 908 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 CAMK1Q14012 370 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 BTG3Q14201 252 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 CLUL1Q15846 466 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 PKN1Q16512 942 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 PFKFB3Q16875 520 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 SWSAP1Q6NVH7 229 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 MTHFD1LQ6UB35 978 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 ABHD15Q6UXT9 468 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 PLPPR4Q7Z2D5 763 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 CCDC60Q8IWA6 550 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 FAM178BQ8IXR5 827 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 NEK9Q8TD19 979 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 SLC7A3Q8WY07 619 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 KCNB2Q92953 911 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 PHKBQ93100 1093 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 ZNF689Q96CS4 500 aaPredicted RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 LRFN3Q9BTN0 628 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 CELF4Q9BZC1 486 aaKnown RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 NSUN3Q9H649 340 aaKnown RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 RC3H2Q9HBD1 1191 aaKnown RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 ALG13Q9NP73 1137 aaKnown RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 CLDND1Q9NY35 253 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 PADI3Q9ULW8 664 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 GINS2Q9Y248 185 aa7.06□□□□□ -1.28
NUP88-212ENST00000576708 NOC2LQ9Y3T9 749 aaKnown RBP7.06□□□□□ -1.28
NUP88-212ENST00000576708 NLRC5Q86WI3 1866 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 IGKV6D-21A0A0A0MT36 114 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 SMIM35A0A1B0GVV1 85 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 C5orf67F2Z3F1 127 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 EDIL3O43854 480 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 DTNBO60941 627 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 SCG2P13521 617 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 HSPA4P34932 840 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 CCT2P78371 535 aaKnown RBP7.05□□□□□ -1.28
NUP88-212ENST00000576708 DAB2P98082 770 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 HYAL1Q12794 435 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 PAK2Q13177 524 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 AP3B2Q13367 1082 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 KRT32Q14532 448 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 TIGD5Q53EQ6 642 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 DTHD1Q6ZMT9 781 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 KIAA0319LQ8IZA0 1049 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 ATP8B4Q8TF62 1192 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 TMEM40Q8WWA1 233 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 CRYGNQ8WXF5 182 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 GJA10Q969M2 543 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 PABPC5Q96DU9 382 aaKnown RBP7.05□□□□□ -1.28
NUP88-212ENST00000576708 ZNF668Q96K58 619 aaPredicted RBP7.05□□□□□ -1.28
NUP88-212ENST00000576708 C1QTNF1Q9BXJ1 281 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 C12orf49Q9H741 205 aa7.05□□□□□ -1.28
NUP88-212ENST00000576708 NCOA5Q9HCD5 579 aaKnown RBP7.05□□□□□ -1.28
NUP88-212ENST00000576708 ERVK-5Q9HDB9 667 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms