RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 THTPAQ9BU02 230 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 THAP2Q9H0W7 228 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 PIK3C2BO00750 1634 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 GSTA2P09210 222 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 MYBL1P10243 752 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 NPEPPSP55786 919 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 SLC30A5Q8TAD4 765 aa13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 REXO2Q9Y3B8 237 aaKnown RBP13.92□□□□□ -0.18
PCDHGB3-201ENST00000576222 CAPN9O14815 690 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 SORBS3O60504 671 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 PON1P27169 355 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 EIF1ADQ8N9N8 165 aaKnown RBP13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 TMEM35BQ8NCS4 154 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 FAM53CQ9NYF3 392 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZNF711Q9Y462 761 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 STAT2P52630 851 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 MDH1BQ5I0G3 518 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 CXorf38Q8TB03 319 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 KLC2Q9H0B6 622 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 XAB2Q9HCS7 855 aaKnown RBP13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 RGL1Q9NZL6 768 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 MTO1Q9Y2Z2 717 aaKnown RBP13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 APOEP02649 317 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 ALDH5A1P51649 535 aaPredicted RBP13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 ZSWIM1Q9BR11 485 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 TLK1Q9UKI8 766 aa13.91□□□□□ -0.18
PCDHGB3-201ENST00000576222 PRPSAP2O60256 369 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 KPNB1Q14974 876 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 SH3GL2Q99962 352 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CDC42EP4Q9H3Q1 356 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 IP6K2Q9UHH9 426 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CES2O00748 559 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 SLC16A4O15374 487 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 PTENP60484 403 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 IFI35P80217 286 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 THOC5Q13769 683 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 NLRP9Q7RTR0 991 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 OSGEPQ9NPF4 335 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 NXF1Q9UBU9 619 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CNOT7Q9UIV1 285 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 MID2Q9UJV3 735 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 SHOX2O60902 331 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 EEF1B2P24534 225 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 SERPINB3P29508 390 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 COL15A1P39059 1388 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 ALDH18A1P54886 795 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 PDZD4Q76G19 769 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 DNAAF5Q86Y56 855 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 HSPH1Q92598 858 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 BAZ2BQ9UIF8 2168 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 ATMINO43313 823 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 STX1BP61266 288 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CRELD2Q6UXH1 353 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 IQCKQ8N0W5 287 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 FBXL13Q8NEE6 735 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 PGM2Q96G03 612 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 UPF3AQ9H1J1 476 aaKnown RBP13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
PCDHGB3-201ENST00000576222 A0A0A6YYK5 440 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 DNAJC6O75061 913 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 CALB1P05937 261 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 TFAMQ00059 246 aaKnown RBP13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 RARS2Q5T160 578 aaKnown RBP13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 GRAMD4Q6IC98 578 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 AGAP11Q8TF27 550 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 HAUS8Q9BT25 410 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 AIPL1Q9NZN9 384 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 OPLAHO14841 1288 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 MED7O43513 233 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 TFDP2Q14188 446 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 SDCCAG3Q96C92 435 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 KLF6Q99612 283 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 PI4KBQ9UBF8 816 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 EP400NLQ6ZTU2 488 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 DNAAF3Q8N9W5 541 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 FAM118BQ9BPY3 351 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 OSBPL8Q9BZF1 889 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 SLIT1O75093 1534 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 KRT10P13645 584 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 CPA2P48052 419 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 HSPA2P54652 639 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 LAMB3Q13751 1172 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms