RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CLTAP09496 248 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 MLH1P40692 756 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 BTG3Q14201 252 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 SKOR2Q2VWA4 1001 aaPredicted RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 PAN2Q504Q3 1202 aaKnown RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 SEZ6Q53EL9 994 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 CAVIN1Q6NZI2 390 aaKnown RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 RBM43Q6ZSC3 357 aaKnown RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 ADSSL1Q8N142 457 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 CASD1Q96PB1 797 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 RPS6KC1Q96S38 1066 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 GAD1Q99259 594 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 MRPL9Q9BYD2 267 aaKnown RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 PCIF1Q9H4Z3 704 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 RC3H2Q9HBD1 1191 aaKnown RBP15.25■□□□□ 0.03
RPAIN-217ENST00000575711 KLK14Q9P0G3 267 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 TMEM63CQ9P1W3 806 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 INPP5FQ9Y2H2 1132 aa15.25■□□□□ 0.03
RPAIN-217ENST00000575711 ARL5CA6NH57 179 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 PSMA7O14818 248 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 CLIC2O15247 247 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 FAM189A1O60320 539 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 BMP6P22004 513 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 PBX2P40425 430 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 HSP90AA2PQ14568 343 aaPredicted RBP15.24■□□□□ 0.03
RPAIN-217ENST00000575711 NFKBIBQ15653 356 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 NOMO2Q5JPE7 1267 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 C12orf56Q8IXR9 622 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 TMEM192Q8IY95 271 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 LRRC43Q8N309 656 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 FIBCD1Q8N539 461 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 SP7Q8TDD2 431 aaPredicted RBP15.24■□□□□ 0.03
RPAIN-217ENST00000575711 NOC3LQ8WTT2 800 aaKnown RBP15.24■□□□□ 0.03
RPAIN-217ENST00000575711 SAAL1Q96ER3 474 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 ZFP42Q96MM3 310 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 FAM213AQ9BRX8 229 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 RPF1Q9H9Y2 349 aaKnown RBP15.24■□□□□ 0.03
RPAIN-217ENST00000575711 HSPBP1Q9NZL4 362 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 KANSL3Q9P2N6 904 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 TRAF3IP3Q9Y228 551 aa15.24■□□□□ 0.03
RPAIN-217ENST00000575711 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 LCHNA4D1U4 455 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 INPPL1O15357 1258 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 EXTL3O43909 919 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 CA3P07451 260 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 CXCL8P10145 99 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 MYOGP15173 224 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 DNAJB2P25686 324 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 TNFSF9P41273 254 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 ACOT2P49753 483 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 CYP2J2P51589 502 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 ZBTB41Q5SVQ8 909 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 GPD1LQ8N335 351 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 TIFAQ96CG3 184 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 DHTKD1Q96HY7 919 aaPredicted RBP15.23■□□□□ 0.03
RPAIN-217ENST00000575711 SNX27Q96L92 541 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 TSG101Q99816 390 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 KIAA1586Q9HCI6 787 aa15.23■□□□□ 0.03
RPAIN-217ENST00000575711 CPSF3Q9UKF6 684 aaKnown RBP15.23■□□□□ 0.03
RPAIN-217ENST00000575711 YBX2Q9Y2T7 364 aaKnown RBP15.23■□□□□ 0.03
RPAIN-217ENST00000575711 RANBP2P49792 3224 aaKnown RBP15.22■□□□□ 0.03
RPAIN-217ENST00000575711 GOLGA8IPA6NC78 632 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 GOLGA8JA6NMD2 632 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 EXOC3O60645 756 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 POMCP01189 267 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 NR3C1P04150 777 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
RPAIN-217ENST00000575711 SCNN1GP51170 649 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 NLRP12P59046 1061 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 POU5F1Q01860 360 aaKnown RBP15.22■□□□□ 0.03
RPAIN-217ENST00000575711 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
RPAIN-217ENST00000575711 PPP2R3AQ06190 1150 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
RPAIN-217ENST00000575711 NFIL3Q16649 462 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 SPOUT1Q5T280 376 aaKnown RBP15.22■□□□□ 0.03
RPAIN-217ENST00000575711 CENPPQ6IPU0 288 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 KLHL10Q6JEL2 608 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 XXYLT1Q8NBI6 393 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 P2RX5Q93086 422 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 NKX2-4Q9H2Z4 354 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 SLC28A3Q9HAS3 691 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 DACH1Q9UI36 760 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 COL4A6Q14031 1691 aa15.22■□□□□ 0.03
RPAIN-217ENST00000575711 BICDL2A1A5D9 508 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 ZNF233A6NK53 670 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 PPP1R3GB7ZBB8 358 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 THP07101 528 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 CCNE1P24864 410 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
RPAIN-217ENST00000575711 AFF1P51825 1210 aaKnown RBP15.21■□□□□ 0.03
RPAIN-217ENST00000575711 LRRC63Q05C16 580 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 GRIK3Q13003 919 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 PAK1Q13153 545 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 EDRF1Q3B7T1 1238 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms