RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 GBP3Q9H0R5 595 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 CDT1Q9H211 546 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 ZHX3Q9H4I2 956 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 PRDM6Q9NQX0 595 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 OLFML3Q9NRN5 406 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 TOPORSQ9NS56 1045 aaPredicted RBP14.88□□□□□ -0.03
CIITA-210ENST00000575513 IRAK3Q9Y616 596 aa14.88□□□□□ -0.03
CIITA-210ENST00000575513 NT5C1B-RDH14C9J2C7 533 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 K7ENM7 598 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 NRP1O14786 923 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 B4GALT3O60512 393 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 THP07101 528 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 IRS1P35568 1242 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 YARSP54577 528 aaKnown RBP14.87□□□□□ -0.03
CIITA-210ENST00000575513 HYAL1Q12794 435 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 ALCAMQ13740 583 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 XKR4Q5GH76 650 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 MAP4K3Q8IVH8 894 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 MRPL43Q8N983 215 aaKnown RBP14.87□□□□□ -0.03
CIITA-210ENST00000575513 ACAP3Q96P50 834 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 TCF25Q9BQ70 676 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 COLEC11Q9BWP8 271 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 STRA6Q9BX79 667 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 UBE2ZQ9H832 354 aaPredicted RBP14.87□□□□□ -0.03
CIITA-210ENST00000575513 KLK14Q9P0G3 267 aa14.87□□□□□ -0.03
CIITA-210ENST00000575513 PTGESO14684 152 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 POLR2DO15514 142 aaKnown RBP14.86□□□□□ -0.03
CIITA-210ENST00000575513 EFEMP2O95967 443 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 ADAM15Q13444 863 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 TUSC3Q13454 348 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
CIITA-210ENST00000575513 NOLC1Q14978 699 aaKnown RBP eCLIP14.86□□□□□ -0.03
CIITA-210ENST00000575513 TJAP1Q5JTD0 557 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 TMC7Q7Z402 723 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 TMEM173Q86WV6 379 aaPredicted RBP14.86□□□□□ -0.03
CIITA-210ENST00000575513 GPR65Q8IYL9 337 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 VPS52Q8N1B4 723 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 EFHBQ8N7U6 833 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 C7orf25Q9BPX7 421 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 TLE6Q9H808 572 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 ENTPD7Q9NQZ7 604 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 USP25Q9UHP3 1055 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 GDAQ9Y2T3 454 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 PCDHB13Q9Y5F0 798 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.86□□□□□ -0.03
CIITA-210ENST00000575513 REV3LO60673 3130 aa14.86□□□□□ -0.03
CIITA-210ENST00000575513 XIRP2A4UGR9 3374 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 KIAA1671Q9BY89 1806 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 FAM237AA0A1B0GTK4 181 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 HNRNPDLO14979 420 aaKnown RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 PPP1R37O75864 691 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 CTSAP10619 480 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 NMT1P30419 496 aaKnown RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 OR1G1P47890 313 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 LIG4P49917 911 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 POU5F1Q01860 360 aaKnown RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 NAB2Q15742 525 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 PUS10Q3MIT2 529 aaKnown RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 LEXMQ3ZCV2 418 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 HERC4Q5GLZ8 1057 aaPredicted RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 SLFN12LQ6IEE8 588 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 TMEM184AQ6ZMB5 413 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 ZBTB33Q86T24 672 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 SFR1Q86XK3 245 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 CCDC65Q8IXS2 484 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 DHX58Q96C10 678 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 BICD1Q96G01 975 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 ZBTB45Q96K62 511 aaPredicted RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 PPP1R10Q96QC0 940 aaKnown RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 TSPAN18Q96SJ8 248 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 TRIM9Q9C026 710 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 ZBP1Q9H171 429 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 MRPL44Q9H9J2 332 aaKnown RBP14.85□□□□□ -0.03
CIITA-210ENST00000575513 PLEKHA5Q9HAU0 1116 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 SLC38A7Q9NVC3 462 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 PANK4Q9NVE7 773 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 SSX2IPQ9Y2D8 614 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 STYXL1Q9Y6J8 313 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 MYH15Q9Y2K3 1946 aa14.85□□□□□ -0.03
CIITA-210ENST00000575513 SMIM28A0A1B0GU29 152 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 A0A1W2PQ27 194 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 A0A1W2PQ64 194 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 A0A1W2PQD8 194 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 C2orf71A6NGG8 1288 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 CXCL14O95715 111 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 CLTAP09496 248 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 SLFN14P0C7P3 912 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 IDEP14735 1019 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 KCNE1P15382 129 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 NRIP1P48552 1158 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 DUSP6Q16828 381 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 ADGRD2Q7Z7M1 963 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 RNF168Q8IYW5 571 aaPredicted RBP14.84□□□□□ -0.03
CIITA-210ENST00000575513 BCL7CQ8WUZ0 217 aaPredicted RBP14.84□□□□□ -0.03
CIITA-210ENST00000575513 UROC1Q96N76 676 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 IPO9Q96P70 1041 aaKnown RBP14.84□□□□□ -0.03
CIITA-210ENST00000575513 MARCH5Q9NX47 278 aa14.84□□□□□ -0.03
CIITA-210ENST00000575513 CHMP5Q9NZZ3 219 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms