RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 RBM23Q86U06 439 aaKnown RBP22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 CEP120Q8N960 986 aa22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 BCL7CQ8WUZ0 217 aaPredicted RBP22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 STAMQ92783 540 aa22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 KCNN1Q92952 543 aa22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 FIZ1Q96SL8 496 aa22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 CCDC94Q9BW85 323 aaPredicted RBP22.69■■□□□ 1.22
HCFC1R1-208ENST00000575214 POLR2DO15514 142 aaKnown RBP22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 NCK2O43639 380 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 GAP43P17677 238 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 ABCD1P33897 745 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 CA8P35219 290 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 GTF2F1P35269 517 aaKnown RBP eCLIP22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 LIG4P49917 911 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 YARSP54577 528 aaKnown RBP22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 NOLC1Q14978 699 aaKnown RBP eCLIP22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 AAK1Q2M2I8 961 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 PABPC5Q96DU9 382 aaKnown RBP22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 LRRC27Q9C0I9 530 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 TNMDQ9H2S6 317 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 NGRNQ9NPE2 291 aaKnown RBP22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 CLDND1Q9NY35 253 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 SEL1LQ9UBV2 794 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 REV3LO60673 3130 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 ATG2AQ2TAZ0 1938 aa22.68■■□□□ 1.22
HCFC1R1-208ENST00000575214 ABLIM1O14639 778 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 PTGESO14684 152 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 HNRNPDLO14979 420 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 CLDN3O15551 220 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 THP07101 528 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 KCNA5P22460 613 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 NRIP1P48552 1158 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 NUCB2P80303 420 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 BMS1Q14692 1282 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 DDX53Q86TM3 631 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 VPS52Q8N1B4 723 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 ASB2Q96Q27 587 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 TLE6Q9H808 572 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 MRPL44Q9H9J2 332 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 TOPORSQ9NS56 1045 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 TTC28Q96AY4 2481 aa22.67■■□□□ 1.22
HCFC1R1-208ENST00000575214 GTF2BQ00403 316 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 AMPD3Q01432 767 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 SMC1AQ14683 1233 aaKnown RBP22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 ZC2HC1CQ53FD0 456 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 HERC4Q5GLZ8 1057 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 TJAP1Q5JTD0 557 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 SCAND2PQ9GZW5 306 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 CXCL16Q9H2A7 254 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 PANK4Q9NVE7 773 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 KBTBD4Q9NVX7 518 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 TBC1D7Q9P0N9 293 aa22.66■■□□□ 1.22
HCFC1R1-208ENST00000575214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 DLL1O00548 723 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 PER2O15055 1255 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 MCL1Q07820 350 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 TUSC3Q13454 348 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 GLRA4Q5JXX5 417 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 ZNF720Q7Z2F6 126 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 MAP4K3Q8IVH8 894 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 ACAP3Q96P50 834 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 PYM1Q9BRP8 204 aaKnown RBP22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 ZBP1Q9H171 429 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 ST6GALNAC4Q9H4F1 302 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 MAGEF1Q9HAY2 307 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 MARCH5Q9NX47 278 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 KCNH3Q9ULD8 1083 aa22.65■■□□□ 1.22
HCFC1R1-208ENST00000575214 CASTOR2A6NHX0 329 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 HIDE1A8MVS5 230 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 PIGRP01833 764 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 COL19A1Q14993 1142 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 ADALQ6DHV7 355 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 CCDC65Q8IXS2 484 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 COLEC11Q9BWP8 271 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 CACNG4Q9UBN1 327 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 STK39Q9UEW8 545 aa22.64■■□□□ 1.22
HCFC1R1-208ENST00000575214 SPTBN5Q9NRC6 3674 aaKnown RBP22.64■■□□□ 1.21
HCFC1R1-208ENST00000575214 FRMD3A2A2Y4 597 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 H3BQ06 376 aaPredicted RBP22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 LINC01565O15544 149 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 GCNT3O95395 438 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 CXCL14O95715 111 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 CTSAP10619 480 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 KCNQ1P51787 676 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 ASIC1P78348 528 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 TPRNQ4KMQ1 711 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 SEZ6Q53EL9 994 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 EFHBQ8N7U6 833 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 AUTS2Q8WXX7 1259 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 RABGGTAQ92696 567 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 HVCN1Q96D96 273 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 SNX27Q96L92 541 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 CDCA3Q99618 268 aaPredicted RBP22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 VN1R3Q9BXE9 311 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 TRIM9Q9C026 710 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 HAPLN2Q9GZV7 340 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 OLFML3Q9NRN5 406 aa22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 TDRD15B5MCY1 1934 aaKnown RBP22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.63■■□□□ 1.21
HCFC1R1-208ENST00000575214 A0A1B0GVL5 298 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms