RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CNOT10Q9H9A5 744 aaKnown RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 PXMP2Q9NR77 195 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 HOMER2Q9NSB8 354 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 UVRAGQ9P2Y5 699 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 PARP2Q9UGN5 583 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 ZNRF3Q9ULT6 936 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 TCRBV7S2A1N4TA0A589 114 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CCDC169A6NNP5 214 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 FSBPO95073 299 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 COILP38432 576 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 ENPEPQ07075 957 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 ACAD10Q6JQN1 1059 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 C12orf50Q8NA57 414 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CENPTQ96BT3 561 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 ZNF653Q96CK0 615 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 PGM2Q96G03 612 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 NT5C1BQ96P26 610 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 POP1Q99575 1024 aaKnown RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 KIFC3Q9BVG8 833 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 RAB20Q9NX57 234 aa9.61□□□□□ -0.87
NCBP3-204ENST00000574911 CNOT7Q9UIV1 285 aaKnown RBP9.61□□□□□ -0.87
NCBP3-204ENST00000574911 DENND3A2RUS2 1198 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 STBD1O95210 358 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 RARAP10276 462 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 PDE6CP51160 858 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 DMP1Q13316 513 aaPredicted RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 BYSLQ13895 437 aaKnown RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 DENND2CQ68D51 928 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 RNF207Q6ZRF8 634 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 CYFIP1Q7L576 1253 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 FBXL13Q8NEE6 735 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 TAS1R2Q8TE23 839 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 PSPC1Q8WXF1 523 aaKnown RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 KIFAP3Q92845 792 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 ART4Q93070 314 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 RMDN3Q96TC7 470 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 TMEM109Q9BVC6 243 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 MOV10L1Q9BXT6 1211 aaKnown RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 KMT5AQ9NQR1 393 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 TOPORSQ9NS56 1045 aaPredicted RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 GINM1Q9NU53 330 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 DDX20Q9UHI6 824 aaKnown RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 MTUS1Q9ULD2 1270 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 SPOPO43791 374 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 CYP24A1Q07973 514 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 QPCTQ16769 361 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 CLEC16AQ2KHT3 1053 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 ARHGEF16Q5VV41 709 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 XRRA1Q6P2D8 792 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 TEPSINQ96N21 525 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 LRRC19Q9H756 370 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 C17orf75Q9HAS0 396 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 MTRF1LQ9UGC7 380 aaKnown RBP9.6□□□□□ -0.87
NCBP3-204ENST00000574911 PNMA2Q9UL42 364 aa9.6□□□□□ -0.87
NCBP3-204ENST00000574911 ZBED4O75132 1171 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 KCNA3P22001 575 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 RWDD2BP57060 319 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 PPARDQ03181 441 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 SLC29A2Q14542 456 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 NIM1KQ8IY84 436 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 CNPY4Q8N129 248 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 DHX38Q92620 1227 aaKnown RBP9.59□□□□□ -0.87
NCBP3-204ENST00000574911 TATDN2Q93075 761 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 FAM129AQ9BZQ8 928 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 MYOZ2Q9NPC6 264 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 PDLIM7Q9NR12 457 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 TCEAL9Q9UHQ7 104 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 PCDHA10Q9Y5I2 948 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
NCBP3-204ENST00000574911 FSCN2O14926 492 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 DRD4P21917 467 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 MMP13P45452 471 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 CXCL9Q07325 125 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 IFT88Q13099 833 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 UBAP2Q5T6F2 1119 aaKnown RBP9.59□□□□□ -0.87
NCBP3-204ENST00000574911 ERMARDQ5T6L9 678 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 ENOSF1Q7L5Y1 443 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 OTUD6AQ7L8S5 288 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 TRMT1LQ7Z2T5 733 aaKnown RBP9.59□□□□□ -0.87
NCBP3-204ENST00000574911 VSIG10LQ86VR7 867 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 GPD1LQ8N335 351 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 SLCO2A1Q92959 643 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 SEMA4AQ9H3S1 761 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 CAPN7Q9Y6W3 813 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 FER1L6Q2WGJ9 1857 aa9.59□□□□□ -0.87
NCBP3-204ENST00000574911 ZNF862O60290 1169 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ZC3H11AO75152 810 aaKnown RBP eCLIP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 UNGP13051 313 aaPredicted RBP9.58□□□□□ -0.88
NCBP3-204ENST00000574911 RARGP13631 454 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 GARTP22102 1010 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 CCND2P30279 289 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 SOX10P56693 466 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 RTP1P59025 263 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 GCNT1Q02742 428 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 DRP2Q13474 957 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 SLMAPQ14BN4 828 aa9.58□□□□□ -0.88
NCBP3-204ENST00000574911 ZNF568Q3ZCX4 644 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms