RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 TATDN2Q93075 761 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 KIAA1586Q9HCI6 787 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 PDE11AQ9HCR9 933 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 VPS18Q9P253 973 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 RSPH14Q9UHP6 348 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 DMGDHQ9UI17 866 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 ANKRD62A6NC57 917 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 MAP2K7O14733 419 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 BUB1BO60566 1050 aaPredicted RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 MAFO75444 373 aaPredicted RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 PRPF4BQ13523 1007 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 MAP9Q49MG5 647 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 C8orf74Q6P047 294 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 KCNV1Q6PIU1 500 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 SLC47A2Q86VL8 602 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 SYCE1Q8N0S2 351 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 DHX38Q92620 1227 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 MSTO1Q9BUK6 570 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 HAPLN2Q9GZV7 340 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 TRIM66O15016 1216 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 CEP104O60308 925 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 FTLP02792 175 aaPredicted RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 EDN1P05305 212 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 OAS2P29728 719 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 WNT7BP56706 349 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 BIRC3Q13489 604 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 SMC1AQ14683 1233 aaKnown RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 CASP8Q14790 479 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 MAP1SQ66K74 1059 aaPredicted RBP11.28□□□□□ -0.6
USP43-205ENST00000574408 SLFN12LQ6IEE8 588 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP43-205ENST00000574408 LRRC71Q8N4P6 559 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
USP43-205ENST00000574408 ADCY3O60266 1144 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 MYBL2P10244 700 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 TXNP10599 105 aaKnown RBP11.27□□□□□ -0.6
USP43-205ENST00000574408 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.6
USP43-205ENST00000574408 PSMD6Q15008 389 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 SLFN11Q7Z7L1 901 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 ZNF516Q92618 1163 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 PCDHB18PQ96TA0 734 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.6
USP43-205ENST00000574408 RBAKQ9NYW8 714 aaPredicted RBP11.27□□□□□ -0.6
USP43-205ENST00000574408 NOCTQ9UK39 431 aaKnown RBP11.27□□□□□ -0.6
USP43-205ENST00000574408 CLSTN1O94985 981 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 PIGRP01833 764 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 SRGAP2CP0DJJ0 459 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 KRT5P13647 590 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 CHRNB2P17787 502 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 METTL13Q8N6R0 699 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 IPO4Q8TEX9 1081 aaKnown RBP11.27□□□□□ -0.61
USP43-205ENST00000574408 ATP8B4Q8TF62 1192 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 AMFRQ9UKV5 643 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
USP43-205ENST00000574408 KIAA0391O15091 583 aaKnown RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 SCP2P22307 547 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 SEZ6Q53EL9 994 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 CRELD2Q6UXH1 353 aaPredicted RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 CCNI2Q6ZMN8 369 aaPredicted RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 NT5DC3Q86UY8 548 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 PBKQ96KB5 322 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 CTTNBP2NLQ9P2B4 639 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 SUCLA2Q9P2R7 463 aaPredicted RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 LGR5O75473 907 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 HLA-DRAP01903 254 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 MMEP08473 750 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 CYP11B1P15538 503 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 PIK3CAP42336 1068 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 PDE6CP51160 858 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 PLCB4Q15147 1175 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 CCDC62Q6P9F0 684 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 USP38Q8NB14 1042 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 TRAPPC12Q8WVT3 735 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 KRT12Q99456 494 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 SELENOOQ9BVL4 669 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 STIM2Q9P246 746 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 CHORDC1Q9UHD1 332 aaPredicted RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 LRRC37A2A6NM11 1700 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 PTPRJQ12913 1337 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 A0A0B4J269 797 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 CAPN2P17655 700 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 ENPEPQ07075 957 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 TTLL4Q14679 1199 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 ZACNQ401N2 412 aa11.26□□□□□ -0.61
USP43-205ENST00000574408 DNAJC21Q5F1R6 531 aaKnown RBP11.26□□□□□ -0.61
USP43-205ENST00000574408 IER5Q5VY09 327 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms