RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PRDM12Q9H4Q4 367 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 CWH43Q9H720 699 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 TBC1D13Q9NVG8 400 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 SZT2Q5T011 3432 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 H3BNC9 293 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 ZC3H11AO75152 810 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 GADD45BO75293 160 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 PRPF6O94906 941 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 LDHAP00338 332 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 POMCP01189 267 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 THP07101 528 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 CLTAP09496 248 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 OSTNP61366 133 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 KRT17Q04695 432 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 EHHADHQ08426 723 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 DPYDQ12882 1025 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 GRIK3Q13003 919 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 HSP90AA2PQ14568 343 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 KMT5BQ4FZB7 885 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 LRRC55Q6ZSA7 311 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 ELOA2Q8IYF1 753 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 COLGALT1Q8NBJ5 622 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 POMGNT1Q8WZA1 660 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 CDX2Q99626 313 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 TMEM175Q9BSA9 504 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 GTPBP4Q9BZE4 634 aaKnown RBP13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 LMCD1Q9NZU5 365 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 KLK14Q9P0G3 267 aa13.94□□□□□ -0.18
TRAPPC1-206ENST00000573989 A0A0B4J269 797 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 ABLIM1O14639 778 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 OGTO15294 1046 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 KLRC4O43908 158 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 RHOBTB3O94955 611 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 ALDH2P05091 517 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 FOSL2P15408 326 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 SCNN1GP51170 649 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 CASP5P51878 434 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 UBE3AQ05086 875 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 KCNB1Q14721 858 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 ZNF507Q8TCN5 953 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 ZFP42Q96MM3 310 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 LMAN2LQ9H0V9 348 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 RPF1Q9H9Y2 349 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 PLEKHA5Q9HAU0 1116 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 SLC38A7Q9NVC3 462 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 CGNQ9P2M7 1197 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 STK39Q9UEW8 545 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 PUF60Q9UHX1 559 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 AGO2Q9UKV8 859 aaKnown RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 COL4A4P53420 1690 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC1-206ENST00000573989 ANKRD63C9JTQ0 380 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 LINC00271P0C7V0 271 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 GARTP22102 1010 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 IGFBP4P22692 258 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 BCAR1P56945 870 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 PPP2R3AQ06190 1150 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 KCNA1Q09470 495 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 PNOCQ13519 176 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 ARMCX5Q6P1M9 558 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 EPM2AIP1Q7L775 607 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 CD302Q8IX05 232 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 CEP120Q8N960 986 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 GOLGA5Q8TBA6 731 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 MYLIPQ8WY64 445 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 HPS3Q969F9 1004 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 SMARCE1Q969G3 411 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 TMEM169Q96HH4 297 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 GUCD1Q96NT3 240 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 GSDMAQ96QA5 445 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 TSPAN18Q96SJ8 248 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 FAN1Q9Y2M0 1017 aa13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 PDCD11Q14690 1871 aaKnown RBP13.92□□□□□ -0.18
TRAPPC1-206ENST00000573989 PLXNA4Q9HCM2 1894 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 XPOTO43592 962 aaKnown RBP13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 FGF18O76093 207 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 OR1G1P47890 313 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 POU5F1Q01860 360 aaKnown RBP13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 STK4Q13043 487 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 KNOP1Q1ED39 458 aaKnown RBP13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 BMT2Q1RMZ1 405 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 SLC39A4Q6P5W5 647 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 ZNF280BQ86YH2 543 aa13.91□□□□□ -0.18
TRAPPC1-206ENST00000573989 COLGALT2Q8IYK4 626 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms