RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PLIN2Q99541 437 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 ACO2Q99798 780 aaKnown RBP19.06■□□□□ 0.64
SMG6-212ENST00000573153 NT5C3AQ9H0P0 336 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 MYH11P35749 1972 aa19.06■□□□□ 0.64
SMG6-212ENST00000573153 PRR33A8MZF0 331 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 K7ELQ4 463 aaPredicted RBP19.05■□□□□ 0.64
SMG6-212ENST00000573153 TEX28O15482 410 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 KIF4AO95239 1232 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 BRD1O95696 1058 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 SRGAP2BP0DMP2 458 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 ALADP13716 330 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 LIG1P18858 919 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 TUSC3Q13454 348 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
SMG6-212ENST00000573153 DCAF4L1Q3SXM0 396 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 ATF7IP2Q5U623 682 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 KIAA1841Q6NSI8 718 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 ALKAL1Q6UXT8 129 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 HACE1Q8IYU2 909 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 TMEM161BQ8NDZ6 487 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 SPIRE2Q8WWL2 714 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 SNX21Q969T3 373 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 IFT74Q96LB3 600 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 FIZ1Q96SL8 496 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 TIPINQ9BVW5 301 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 TARS2Q9BW92 718 aaKnown RBP19.05■□□□□ 0.64
SMG6-212ENST00000573153 STK39Q9UEW8 545 aa19.05■□□□□ 0.64
SMG6-212ENST00000573153 TRIP11Q15643 1979 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 NPHP3-ACAD11A0A0J9YXS1 232 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 PLA2G4BP0C869 781 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 SYT1P21579 422 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 GLUD2P49448 558 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 ITIH3Q06033 890 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 RTP2Q5QGT7 225 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 RARS2Q5T160 578 aaKnown RBP19.04■□□□□ 0.64
SMG6-212ENST00000573153 FAM173BQ6P4H8 233 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 USP49Q70CQ1 688 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 CABP7Q86V35 215 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 GPR65Q8IYL9 337 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 RPGRIP1Q96KN7 1286 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 FBXL18Q96ME1 805 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 HAPLN2Q9GZV7 340 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 C17orf75Q9HAS0 396 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 DZANK1Q9NVP4 752 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 ADAM28Q9UKQ2 775 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 CLIC4Q9Y696 253 aa19.04■□□□□ 0.64
SMG6-212ENST00000573153 CASTOR2A6NHX0 329 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 K7ERI5 159 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 C2CD2LO14523 706 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 SLC16A4O15374 487 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 URODP06132 367 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 MAPTP10636 758 aaKnown RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 PLS3P13797 630 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 GRM5P41594 1212 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 SOX4Q06945 474 aaPredicted RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 RAD51AP2Q09MP3 1159 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 DMP1Q13316 513 aaPredicted RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 HSP90AA2PQ14568 343 aaPredicted RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 TPRNQ4KMQ1 711 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 DRC1Q96MC2 740 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 ZMAT2Q96NC0 199 aaKnown RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 MRPL17Q9NRX2 175 aaKnown RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 KCND2Q9NZV8 630 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 MTMR6Q9Y217 621 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 GDAQ9Y2T3 454 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 MORC2Q9Y6X9 1032 aaPredicted RBP19.03■□□□□ 0.64
SMG6-212ENST00000573153 ZNF318Q5VUA4 2279 aa19.03■□□□□ 0.64
SMG6-212ENST00000573153 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
SMG6-212ENST00000573153 C2CD4DB7Z1M9 353 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 CA8P35219 290 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 LONP1P36776 959 aaKnown RBP19.02■□□□□ 0.64
SMG6-212ENST00000573153 ZNF131P52739 623 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 NCKAP1LP55160 1127 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 GLRA4Q5JXX5 417 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 LILRA6Q6PI73 481 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 GPR149Q86SP6 731 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 PPFIBP1Q86W92 1011 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 C3orf58Q8NDZ4 430 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 EDAQ92838 391 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 ZBTB45Q96K62 511 aaPredicted RBP19.02■□□□□ 0.64
SMG6-212ENST00000573153 COLEC11Q9BWP8 271 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 KMT5AQ9NQR1 393 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 FBXO2Q9UK22 296 aaPredicted RBP19.02■□□□□ 0.64
SMG6-212ENST00000573153 GTF3C3Q9Y5Q9 886 aa19.02■□□□□ 0.64
SMG6-212ENST00000573153 PDCD11Q14690 1871 aaKnown RBP19.02■□□□□ 0.64
SMG6-212ENST00000573153 MYH15Q9Y2K3 1946 aa19.02■□□□□ 0.63
SMG6-212ENST00000573153 CCDC169A6NNP5 214 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 TMEM189-UBE2V1I3L0A0 370 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 THP07101 528 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 PLCG1P19174 1290 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 KARSQ15046 597 aaKnown RBP19.01■□□□□ 0.63
SMG6-212ENST00000573153 ZRSR1Q15695 479 aaKnown RBP19.01■□□□□ 0.63
SMG6-212ENST00000573153 CMASQ8NFW8 434 aaPredicted RBP19.01■□□□□ 0.63
SMG6-212ENST00000573153 HASPINQ8TF76 798 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 ZNF707Q96C28 371 aaPredicted RBP19.01■□□□□ 0.63
SMG6-212ENST00000573153 SNX27Q96L92 541 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 REEP2Q9BRK0 252 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 ADPGKQ9BRR6 497 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 EMILIN2Q9BXX0 1053 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms