RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CENPPQ6IPU0 288 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 GLB1LQ6UWU2 654 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 C12orf56Q8IXR9 622 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CSGALNACT2Q8N6G5 542 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CEP120Q8N960 986 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 SMG8Q8ND04 991 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 URGCPQ8TCY9 931 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 RPS6KC1Q96S38 1066 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 SLC9A7Q96T83 725 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 GDF15Q99988 308 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ANP32EQ9BTT0 268 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 DNAJC25Q9H1X3 360 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 RPF1Q9H9Y2 349 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 RSAD1Q9HA92 442 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 KIAA1586Q9HCI6 787 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 CXXC1Q9P0U4 656 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 INPP5FQ9Y2H2 1132 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 FRMD4BQ9Y2L6 1034 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 LOXHD1Q8IVV2 1947 aa10.29□□□□□ -0.76
NPLOC4-208ENST00000572351 ZNF233A6NK53 670 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 EPB41P11171 864 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 FGFR1P11362 822 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 ATP2A2P16615 1042 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 MLH1P40692 756 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 PMS1P54277 932 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 FKBP3Q00688 224 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 PPP2R3AQ06190 1150 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 SNRNP35Q16560 246 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 NFIL3Q16649 462 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 ZBTB41Q5SVQ8 909 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 C11orf57Q6ZUT1 292 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 TMCO2Q7Z6W1 182 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 MRPL10Q7Z7H8 261 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 CBWD2Q8IUF1 395 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 CREBRFQ8IUR6 639 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 RDH13Q8NBN7 331 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 PHOSPHO2Q8TCD6 241 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 TOP1MTQ969P6 601 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 HAPLN2Q9GZV7 340 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 RBAKQ9NYW8 714 aaPredicted RBP10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 KLK14Q9P0G3 267 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 GIT1Q9Y2X7 761 aa10.28□□□□□ -0.76
NPLOC4-208ENST00000572351 TBKBP1A7MCY6 615 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 MEIS3P2A8K0S8 358 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 BECN2A8MW95 431 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 CXCL8P10145 99 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 KRT13P13646 458 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 ATF7P17544 494 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 BMP8BP34820 402 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 PSMC2P35998 433 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 TNFSF9P41273 254 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 PAN2Q504Q3 1202 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 ZCWPW2Q504Y3 356 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 TTI2Q6NXR4 508 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 FOXR2Q6PJQ5 311 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 AGMOQ6ZNB7 445 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 USP37Q86T82 979 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 HERC6Q8IVU3 1022 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 FAM186BQ8IYM0 893 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 TDHQ8IZJ6 230 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 HELQQ8TDG4 1101 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 CCDC127Q96BQ5 260 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 EEF2KMTQ96G04 330 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 FNBP1Q96RU3 617 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 GAD1Q99259 594 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 MRPL9Q9BYD2 267 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 TMEM117Q9H0C3 514 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 TSPY26PQ9H489 355 aa10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 MAGEC2Q9UBF1 373 aaPredicted RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 CPSF3Q9UKF6 684 aaKnown RBP10.27□□□□□ -0.77
NPLOC4-208ENST00000572351 ARL5CA6NH57 179 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 SLC16A3O15427 465 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 TLL1O43897 1013 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 FAM189A1O60320 539 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 AKAP3O75969 853 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 IL18RAPO95256 599 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 GJB5O95377 273 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 CAVIN2O95810 425 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 GNA14O95837 355 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 POMCP01189 267 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 ZNF165P49910 485 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 GATMP50440 423 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 SCNN1GP51170 649 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 MYL5Q02045 173 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 RNASELQ05823 741 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 BTG3Q14201 252 aaPredicted RBP10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 SURF1Q15526 300 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 ENOX2Q16206 610 aaKnown RBP10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 NOMO2Q5JPE7 1267 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 GLRA4Q5JXX5 417 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
NPLOC4-208ENST00000572351 SPATA1Q5VX52 437 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms