RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NAV3Q8IVL0 2385 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 A0A0U1RQF3 1178 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 GCOM1H8Y6P7 765 aaPredicted RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 GPR32O75388 356 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 STAM2O75886 525 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 DDHD2O94830 711 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 RHOBTB1O94844 696 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 SOD2P04179 222 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 URODP06132 367 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 POLR2MP0CAP2 368 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 FCARP24071 287 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 KLRC1P26715 233 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 GDI1P31150 447 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 AFF1P51825 1210 aaKnown RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 CRYBB1P53674 252 aaPredicted RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 ELF2Q15723 593 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 TAF1BQ53T94 588 aaPredicted RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 HIST2H2BCQ6DN03 193 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 SLCO6A1Q86UG4 719 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 MAP4K3Q8IVH8 894 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 KBTBD3Q8NAB2 608 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 GIMAP8Q8ND71 665 aaPredicted RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 TNPO1Q92973 898 aaKnown RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 TTC14Q96N46 770 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 SEC62Q99442 399 aaKnown RBP7.89□□□□□ -1.15
CHD3-213ENST00000571249 RXFP1Q9HBX9 757 aa7.89□□□□□ -1.15
CHD3-213ENST00000571249 KNTC1P50748 2209 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 CARNS1A5YM72 827 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 TTLL13PA6NNM8 815 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 UPK3BL1B0FP48 263 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 UPK3BL2E5RIL1 263 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 F8W810 466 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 PPP1R11O60927 126 aaPredicted RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 AP1G2O75843 785 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 AKAP3O75969 853 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 VTNP04004 478 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 ZFYP08048 801 aaPredicted RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 FGRP09769 529 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 ENGP17813 658 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 FGFR4P22455 802 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 GBP1P32455 592 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 FXR2P51116 673 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■□□□□ 8
CHD3-213ENST00000571249 RNASELQ05823 741 aaKnown RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 LRRC32Q14392 662 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 TRIP6Q15654 476 aaKnown RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 SLC5A9Q2M3M2 681 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 TRIM61Q5EBN2 209 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 B4GALNT3Q6L9W6 998 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 NLRX1Q86UT6 975 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 SAMD3Q8N6K7 520 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 OR2I1PQ8NGU4 316 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 TTC8Q8TAM2 541 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 PIGKQ92643 395 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 ELSPBP1Q96BH3 223 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 ZNF668Q96K58 619 aaPredicted RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 TRMT61BQ9BVS5 477 aaKnown RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 AZI2Q9H6S1 392 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 PKD2L1Q9P0L9 805 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 DNMT3BQ9UBC3 853 aaKnown RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 STK39Q9UEW8 545 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 BOLA1Q9Y3E2 137 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 NBASA2RRP1 2371 aa7.88□□□□□ -1.15
CHD3-213ENST00000571249 MTCL1Q9Y4B5 1905 aaKnown RBP7.88□□□□□ -1.15
CHD3-213ENST00000571249 COL4A2P08572 1712 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 CCDC163A0A0D9SF12 145 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 SLC38A8A6NNN8 435 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 NRP1O14786 923 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 SH3BP5O60239 455 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 OFD1O75665 1012 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 CD59P13987 128 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
CHD3-213ENST00000571249 KCNA2P16389 499 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 NOMO2Q5JPE7 1267 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 FAM78AQ5JUQ0 283 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 GPR155Q7Z3F1 870 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 PRICKLE2Q7Z3G6 844 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 NLRP7Q8WX94 980 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 IRF7Q92985 503 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 MS4A3Q96HJ5 214 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 HHIPQ96QV1 700 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 SLC4A5Q9BY07 1137 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 POLMQ9NP87 494 aaPredicted RBP7.87□□□□□ -1.15
CHD3-213ENST00000571249 TMEM74BQ9NUR3 256 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 MARCH5Q9NX47 278 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 HSPBP1Q9NZL4 362 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 ANAPC4Q9UJX5 808 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 SSX2IPQ9Y2D8 614 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 FAN1Q9Y2M0 1017 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 PTPRBP23467 1997 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 CACNA1DQ01668 2161 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 PI4KAP42356 2102 aa7.87□□□□□ -1.15
CHD3-213ENST00000571249 WDR81Q562E7 1941 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 NCANO14594 1321 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 TEX51A0A1B0GUA7 166 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 FAM149AA5PLN7 773 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 FAM205CA6NFA0 338 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 FOXP2O15409 715 aa7.86□□□□□ -1.15
CHD3-213ENST00000571249 ALDH2P05091 517 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms