RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 TRAK2O60296 914 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 TBCAO75347 108 aaKnown RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 NR1I2O75469 434 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 TOM1L1O75674 476 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 MCF2P10911 925 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 GRM5P41594 1212 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 STAT6P42226 847 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 OR1G1P47890 313 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 DLX2Q07687 328 aaPredicted RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 BECN1Q14457 450 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 SMC1AQ14683 1233 aaKnown RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 DUSP6Q16828 381 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 AXDND1Q5T1B0 1012 aaPredicted RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 SHC4Q6S5L8 630 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 MPZL3Q6UWV2 235 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.22□□□□□ -0.45
SMG6-206ENST00000570668 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 VN1R3Q9BXE9 311 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 MARCH5Q9NX47 278 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 RCOR1Q9UKL0 485 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 IRAK3Q9Y616 596 aa12.22□□□□□ -0.45
SMG6-206ENST00000570668 C2orf71A6NGG8 1288 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 MYMKA6NI61 221 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 PER2O15055 1255 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 LINC01565O15544 149 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 TBX10O75333 385 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 GLP2RO95838 553 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 EFEMP2O95967 443 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 THP07101 528 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 CTSAP10619 480 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 ABCD1P33897 745 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 GTF2BQ00403 316 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 DNM1Q05193 864 aaKnown RBP12.21□□□□□ -0.45
SMG6-206ENST00000570668 TUSC3Q13454 348 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 KCNC3Q14003 757 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 NAB2Q15742 525 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 PUS10Q3MIT2 529 aaKnown RBP12.21□□□□□ -0.45
SMG6-206ENST00000570668 EP400NLQ6ZTU2 488 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 DYMQ7RTS9 669 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 FAM178BQ8IXR5 827 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 PDILTQ8N807 584 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 CEP120Q8N960 986 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 ADAMTS19Q8TE59 1207 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 DDX12PQ92771 950 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
SMG6-206ENST00000570668 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
SMG6-206ENST00000570668 COLEC11Q9BWP8 271 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 CXCL16Q9H2A7 254 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 ZHX3Q9H4I2 956 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 TBX20Q9UMR3 447 aa12.21□□□□□ -0.45
SMG6-206ENST00000570668 PRG3Q9Y2Y8 225 aaPredicted RBP12.21□□□□□ -0.45
SMG6-206ENST00000570668 TRIP11Q15643 1979 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 K7ENM7 598 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 CLDN3O15551 220 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 CXCL14O95715 111 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 PIGRP01833 764 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 NDUFV1P49821 464 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 MCL1Q07820 350 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 E2F4Q16254 413 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 XKR4Q5GH76 650 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
SMG6-206ENST00000570668 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 TMEM184AQ6ZMB5 413 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 ZBTB33Q86T24 672 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 RNF168Q8IYW5 571 aaPredicted RBP12.2□□□□□ -0.46
SMG6-206ENST00000570668 VN1R2Q8NFZ6 395 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 MSLNLQ96KJ4 702 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 CUEDC2Q9H467 287 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 TOPORSQ9NS56 1045 aaPredicted RBP12.2□□□□□ -0.46
SMG6-206ENST00000570668 CLEC1BQ9P126 229 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 SEL1LQ9UBV2 794 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 PCDHA7Q9UN72 937 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 C5orf42Q9H799 3197 aa12.2□□□□□ -0.46
SMG6-206ENST00000570668 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 FRMD3A2A2Y4 597 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 F8W810 466 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 LILRB3O75022 631 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 SOD2P04179 222 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 GAP43P17677 238 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 NMT1P30419 496 aaKnown RBP12.19□□□□□ -0.46
SMG6-206ENST00000570668 ME1P48163 572 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
SMG6-206ENST00000570668 OSTNP61366 133 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMG6-206ENST00000570668 PTPN14Q15678 1187 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 ZNF720Q7Z2F6 126 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 SFR1Q86XK3 245 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 MAP4K3Q8IVH8 894 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 AUTS2Q8WXX7 1259 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 ACAP3Q96P50 834 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms