RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PPP2R3BQ9Y5P8 575 aa6.59□□□□□ -1.35
CHD9-220ENST00000569794 TMEM127O75204 238 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 CDKL5O76039 1030 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 MXRA7P84157 204 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 MEF2AQ02078 507 aaPredicted RBP6.58□□□□□ -1.36
CHD9-220ENST00000569794 SF3A1Q15459 793 aaKnown RBP6.58□□□□□ -1.36
CHD9-220ENST00000569794 ABHD15Q6UXT9 468 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 ZNF610Q8N9Z0 462 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 ZFP28Q8NHY6 868 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 MDM1Q8TC05 714 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 RSAD2Q8WXG1 361 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 DUSP26Q9BV47 211 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 MTFR1LQ9H019 292 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 WNT8AQ9H1J5 351 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 OSBPL2Q9H1P3 480 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 MS4A5Q9H3V2 200 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 KANSL2Q9H9L4 492 aa6.58□□□□□ -1.36
CHD9-220ENST00000569794 ANKRD62A6NC57 917 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 ASMTLO95671 621 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 FOSP01100 380 aaPredicted RBP6.57□□□□□ -1.36
CHD9-220ENST00000569794 IGLV2-14P01704 120 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 POU3F2P20265 443 aaPredicted RBP6.57□□□□□ -1.36
CHD9-220ENST00000569794 FDXRP22570 491 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 KPNA1P52294 538 aaPredicted RBP6.57□□□□□ -1.36
CHD9-220ENST00000569794 EPHA10Q5JZY3 1008 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 AGAP9Q5VTM2 703 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 SP5Q6BEB4 398 aaPredicted RBP6.57□□□□□ -1.36
CHD9-220ENST00000569794 SNX33Q8WV41 574 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 GPRC5DQ9NZD1 345 aa6.57□□□□□ -1.36
CHD9-220ENST00000569794 DRGXA6NNA5 263 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 GASTP01350 101 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 ITGB6P18564 788 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 NEK4P51957 841 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 CHN2P52757 468 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 MANFP55145 182 aaKnown RBP6.56□□□□□ -1.36
CHD9-220ENST00000569794 NHLH1Q02575 133 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 TRIM25Q14258 630 aaKnown RBP6.56□□□□□ -1.36
CHD9-220ENST00000569794 MFSD14BQ5SR56 506 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 SMC1BQ8NDV3 1235 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 OR14C36Q8NHC7 312 aa6.56□□□□□ -1.36
CHD9-220ENST00000569794 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 MATN4O95460 622 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 LSP1P33241 339 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 KRTAP10-9P60411 292 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 SIM1P81133 766 aaPredicted RBP6.55□□□□□ -1.36
CHD9-220ENST00000569794 FOXF2Q12947 444 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 ZNF169Q14929 603 aaPredicted RBP6.55□□□□□ -1.36
CHD9-220ENST00000569794 TERF2Q15554 542 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 PDZD4Q76G19 769 aaPredicted RBP6.55□□□□□ -1.36
CHD9-220ENST00000569794 GPR149Q86SP6 731 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 RHOT2Q8IXI1 618 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 OR56A1Q8NGH5 318 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 Q96MF0 132 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 ANO3Q9BYT9 981 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 PRDM12Q9H4Q4 367 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 TMEM260Q9NX78 707 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 ATP11BQ9Y2G3 1177 aa6.55□□□□□ -1.36
CHD9-220ENST00000569794 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
CHD9-220ENST00000569794 C1QL1O75973 258 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 ELANEP08246 267 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 CTSSP25774 331 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 NFE2L2Q16236 605 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 PRAMEF14Q5SWL7 426 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 BHLHA9Q7RTU4 235 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 MAPKAPK5Q8IW41 473 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 SRRM1Q8IYB3 904 aaKnown RBP6.54□□□□□ -1.36
CHD9-220ENST00000569794 FAM9AQ8IZU1 332 aaPredicted RBP6.54□□□□□ -1.36
CHD9-220ENST00000569794 SLC35B2Q8TB61 432 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 KIAA1586Q9HCI6 787 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 SEMA4GQ9NTN9 838 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 KLHL11Q9NVR0 708 aa6.54□□□□□ -1.36
CHD9-220ENST00000569794 MGST3O14880 152 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 PJA2O43164 708 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 FLT3LGP49771 235 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 BMS1Q14692 1282 aaKnown RBP6.53□□□□□ -1.36
CHD9-220ENST00000569794 ATXN7L2Q5T6C5 722 aaPredicted RBP6.53□□□□□ -1.36
CHD9-220ENST00000569794 Q6ZNX1 250 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 FRMD7Q6ZUT3 714 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 TMEM132CQ8N3T6 1108 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 ANKS1AQ92625 1134 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 FUBP1Q96AE4 644 aaKnown RBP6.53□□□□□ -1.36
CHD9-220ENST00000569794 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
CHD9-220ENST00000569794 CRHR1P34998 444 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 RARRES1P49788 294 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 SPDYE7PQ495Y7 208 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 B3GNTL1Q67FW5 361 aaPredicted RBP6.52□□□□□ -1.37
CHD9-220ENST00000569794 ZNF480Q8WV37 535 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 PHACTR3Q96KR7 559 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 GPR101Q96P66 508 aaPredicted RBP6.52□□□□□ -1.37
CHD9-220ENST00000569794 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 SPTLC3Q9NUV7 552 aa6.52□□□□□ -1.37
CHD9-220ENST00000569794 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
CHD9-220ENST00000569794 KDM1AO60341 852 aa6.51□□□□□ -1.37
CHD9-220ENST00000569794 CLRN1P58418 232 aa6.51□□□□□ -1.37
CHD9-220ENST00000569794 OCRLQ01968 901 aa6.51□□□□□ -1.37
CHD9-220ENST00000569794 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
CHD9-220ENST00000569794 SYNPOQ8N3V7 929 aa6.51□□□□□ -1.37
CHD9-220ENST00000569794 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms